Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1971 123 5e-23
seq2230 98.7 2e-15
>seq1971
Length=167910
Score = 123 bits (136), Expect = 5e-23
Identities = 378/569 (66%), Gaps = 28/569 (5%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
||||| ||||| ||| ||| ||| |||||| || |||||| | ||||| ||||||||
Sbjct 90987 ATGTATAAGAAAGCGGAGTCTTCCTTCTGGACAGCTGAGGAGGTGGACCTTTCCAAGGAC 91046
Query 42369 A--CGGCCGGCTGGGAGTCACTGT---CTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423
| | || |||||| | ||| ||||| | || | |||| | || | |
Sbjct 91047 ATTCAGCA--CTGGGAAGCCCTGAAGCCTGAGGA-GAGATGTTTCACTTCGTGTG--TTC 91101
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
|||| |||| || || ||| ||||||| ||||| ||| || || | |
Sbjct 91102 TGGCTTTCTCTGCAGCAAGTGATAGCATAGTAAATGAAAACTGGGTGGAGCGGCTTAGCC 91161
Query 42484 AAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
|||| || ||| ||| || || || | ||||| |||||||| || ||| | || ||
Sbjct 91162 AAGAAGTTCAGATTACG--GAAGCCCGTTATTTCTATGGCTTCCAAATTGCCGTGGAAAA 91219
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGA 42598
| | || | ||| || || | || |||| |||| ||||| ||| || ||
Sbjct 91220 CATACATTGTGAAATGGAC---AGTCTCCTCATTGACACTTACATTAAAGATTCCAAAGA 91276
Query 42599 GCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTG 42658
| | || ||||| |||| ||||| |||| || | |||||| ||| || ||
Sbjct 91277 AAGGGAATTCCTCTTCAATGCCAGTGAGACAGTGCCTTGTGTAAAGAAGGCGGCAGATTG 91336
Query 42659 GGCGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTG--GTAGCCTT 42715
||| | | ||||||| || | || || |||| ||| ||| ||| ||||||||
Sbjct 91337 GGCCTTGCGCCGGATCGA-AGACAAAGAGGCTACGTACGG--AGAACCTGTCGTAGCCTT 91393
Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775
| ||| | || || |||||||| || || | || || || || || ||||||||| |
Sbjct 91394 TGTCGCAGCGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCTATATTGTGGCTCAAGAA 91453
Query 42776 GA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834
||| | |||| |||| ||||| || || || ||||| || ||||| ||||||||
Sbjct 91454 ACGAGGACT-GATGGCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGACGAGGGTT 91512
Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
| || | |||||||||||||| |||||
Sbjct 91513 TACACTGTGACTTTGCCTGCCTGATGTTC 91541
>seq2230
Length=225668
Score = 98.7 bits (108), Expect = 2e-15
Identities = 179/255 (70%), Gaps = 8/255 (3%)
Strand=Plus/Plus
Query 42613 TCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGA 42672
|||| | || ||||| ||||||| | |||||| ||| || ||| | | | |||
Sbjct 224849 TCAATGTCAGTGAGACAGTGCCCTGTGTAAAGAAGGCGGCAGATTGGACCTTGCGCCGGA 224908
Query 42673 TCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTG--GTAGCCTTTACCGCCGTCGAGG 42729
|||| || | || || |||| ||| ||| ||| ||||||||| ||| | || |
Sbjct 224909 TCGA-AGACAAAGAGGCTACGTACGG--AGAACCTGTCGTAGCCTTTGTCGCAGCGGAAG 224965
Query 42730 GCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATG 42788
| |||||||| || || | || || || || || ||||||||| | ||| | ||||
Sbjct 224966 GAATCTTCTTTTCTGGGTCTTTTGCATCTATATTGTGGCTCAAGAAACGAGGACT-GATG 225024
Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTT 42848
|||| ||||| || || || || || || ||||| |||||||| | || | ||||||
Sbjct 225025 GCCGGCCTCACATTTTCCAATGATCTTATTAGCAGAGACGAGGGTTTACACTGTGACTTT 225084
Query 42849 GCCTGCCTCCTGTTC 42863
|||||||| |||||
Sbjct 225085 GCCTGCCTGATGTTC 225099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 941499607438320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |