Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1971 123 5e-23 seq2230 98.7 2e-15 >seq1971 Length=167910 Score = 123 bits (136), Expect = 5e-23 Identities = 378/569 (66%), Gaps = 28/569 (5%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||| ||||| ||| ||| ||| |||||| || |||||| | ||||| |||||||| Sbjct 90987 ATGTATAAGAAAGCGGAGTCTTCCTTCTGGACAGCTGAGGAGGTGGACCTTTCCAAGGAC 91046 Query 42369 A--CGGCCGGCTGGGAGTCACTGT---CTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423 | | || |||||| | ||| ||||| | || | |||| | || | | Sbjct 91047 ATTCAGCA--CTGGGAAGCCCTGAAGCCTGAGGA-GAGATGTTTCACTTCGTGTG--TTC 91101 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| |||| || || ||| ||||||| ||||| ||| || || | | Sbjct 91102 TGGCTTTCTCTGCAGCAAGTGATAGCATAGTAAATGAAAACTGGGTGGAGCGGCTTAGCC 91161 Query 42484 AAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 |||| || ||| ||| || || || | ||||| |||||||| || ||| | || || Sbjct 91162 AAGAAGTTCAGATTACG--GAAGCCCGTTATTTCTATGGCTTCCAAATTGCCGTGGAAAA 91219 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGA 42598 | | || | ||| || || | || |||| |||| ||||| ||| || || Sbjct 91220 CATACATTGTGAAATGGAC---AGTCTCCTCATTGACACTTACATTAAAGATTCCAAAGA 91276 Query 42599 GCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTG 42658 | | || ||||| |||| ||||| |||| || | |||||| ||| || || Sbjct 91277 AAGGGAATTCCTCTTCAATGCCAGTGAGACAGTGCCTTGTGTAAAGAAGGCGGCAGATTG 91336 Query 42659 GGCGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTG--GTAGCCTT 42715 ||| | | ||||||| || | || || |||| ||| ||| ||| |||||||| Sbjct 91337 GGCCTTGCGCCGGATCGA-AGACAAAGAGGCTACGTACGG--AGAACCTGTCGTAGCCTT 91393 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | ||| | || || |||||||| || || | || || || || || ||||||||| | Sbjct 91394 TGTCGCAGCGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCTATATTGTGGCTCAAGAA 91453 Query 42776 GA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 ||| | |||| |||| ||||| || || || ||||| || ||||| |||||||| Sbjct 91454 ACGAGGACT-GATGGCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGACGAGGGTT 91512 Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 | || | |||||||||||||| ||||| Sbjct 91513 TACACTGTGACTTTGCCTGCCTGATGTTC 91541 >seq2230 Length=225668 Score = 98.7 bits (108), Expect = 2e-15 Identities = 179/255 (70%), Gaps = 8/255 (3%) Strand=Plus/Plus Query 42613 TCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGA 42672 |||| | || ||||| ||||||| | |||||| ||| || ||| | | | ||| Sbjct 224849 TCAATGTCAGTGAGACAGTGCCCTGTGTAAAGAAGGCGGCAGATTGGACCTTGCGCCGGA 224908 Query 42673 TCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTG--GTAGCCTTTACCGCCGTCGAGG 42729 |||| || | || || |||| ||| ||| ||| ||||||||| ||| | || | Sbjct 224909 TCGA-AGACAAAGAGGCTACGTACGG--AGAACCTGTCGTAGCCTTTGTCGCAGCGGAAG 224965 Query 42730 GCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATG 42788 | |||||||| || || | || || || || || ||||||||| | ||| | |||| Sbjct 224966 GAATCTTCTTTTCTGGGTCTTTTGCATCTATATTGTGGCTCAAGAAACGAGGACT-GATG 225024 Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTT 42848 |||| ||||| || || || || || || ||||| |||||||| | || | |||||| Sbjct 225025 GCCGGCCTCACATTTTCCAATGATCTTATTAGCAGAGACGAGGGTTTACACTGTGACTTT 225084 Query 42849 GCCTGCCTCCTGTTC 42863 |||||||| ||||| Sbjct 225085 GCCTGCCTGATGTTC 225099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941499607438320