Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq15 134 3e-26 seq23190 125 2e-23 seq4599 100 7e-16 seq2697 98.7 2e-15 seq33 98.7 2e-15 seq7051 93.3 1e-13 seq732 84.2 5e-11 >seq15 Length=680746 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||| | ||||| ||||| ||| Sbjct 219393 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 219334 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| ||||||||||| || || |||||| Sbjct 219333 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACG 219277 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || | || || || || ||||| ||||| |||||||| ||||| Sbjct 219276 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 219217 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 219216 ACGAAGATCTGCAT 219203 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||| | ||||| ||||| ||| Sbjct 219621 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 219562 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||||||||||||||| || || || ||| Sbjct 219561 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTGACG 219505 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || | || || || || ||||| ||||| |||||||| ||||| Sbjct 219504 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 219445 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 219444 ACGAAGATCTGCAT 219431 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||| | ||||| ||||| ||| Sbjct 219849 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 219790 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||||||||||||||| || || ||||| Sbjct 219789 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACA 219733 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || | || || || || ||||| ||||| |||||||| ||||| Sbjct 219732 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 219673 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 219672 ACGAAGATCTGCAT 219659 >seq23190 Length=44765 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGAC 17083 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| | ||| ||| || || || |||||||| | || || | || Sbjct 17082 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 17023 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || || || || |||||||| | ||| | || || Sbjct 17022 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 16963 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 16962 TTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 16916 >seq4599 Length=129898 Score = 100 bits (110), Expect = 7e-16 Identities = 138/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||||| || ||||| | ||||| ||||| ||| Sbjct 43880 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGTTTGCCTGCAAAG 43821 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 | || | ||| | | | ||||| ||||||||||||||||| || || | ||| || Sbjct 43820 AGGAGCCTCTGCTTGTCAGC-GGGATGCCTTCTTTATCCTGGATCTTGGCCTGCACATTC 43762 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || ||||| | || || | || ||||| ||||| | |||||| ||||| | | Sbjct 43761 TC---AGGCTCGCTGGGCTCCACCTTCAGGGTGATGGTCTTGCAGGTCAGGGTCTTCATG 43705 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 43704 AAGATCTGCAT 43694 >seq2697 Length=152082 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369 || ||||| ||||| | ||| || || | || |||| | || || | | || ||| Sbjct 60094 GTACGTCCATCTTCCAGTTGCTTGCCAGTAAAACTCAGTCTTTGCTGGGCAGGAGGAATT 60153 Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| | |||||||| || || || ||||||||||| | ||| | ||| || ||| Sbjct 60154 CCTTCCTCGTCCTGGATCTTGGCCTTTACGTTTTCTATCGTATCCGAGGGTTCGACCTCG 60213 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 60214 AGAGTGACGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 60257 >seq33 Length=520270 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | | || | || || || | ||| || || || ||| Sbjct 39740 TCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAG 39681 Query 288343 ATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||| | || | ||||||||||||||||| ||||| || || || || Sbjct 39680 ATCAGTCTTTGCTGGTCAGGA---GGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACA 39624 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 |||||||| | ||| | ||| || | ||| |||| |||||||| ||||| ||||| Sbjct 39623 TTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCTTC 39564 Query 288460 ACGAATATCTGCAT 288473 ||| |||||||| Sbjct 39563 CTGAAAATCTGCAT 39550 >seq7051 Length=109996 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/208 (71%), Gaps = 11/208 (5%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||||| ||| || ||||| || || ||||| | || ||||| ||||| | | Sbjct 16286 AGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCACT 16231 Query 288328 TGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 || || || || |||||||| | |||| | || | || |||||||| ||||||||| Sbjct 16230 TGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGA---GGAATTCCTTCCTTATCCTGG 16174 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || || || |||||| | | ||| | ||| |||| || ||||| ||| || Sbjct 16173 ATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAGCTTCAAGAGTGATGGTCATC 16114 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCA 288472 || | || ||||| | ||| ||||||| Sbjct 16113 CCTGGAAG-GTCTTCATGAAAATCTGCA 16087 >seq732 Length=284533 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| | ||| || || || | || ||| | |||||||| | ||||| ||||| ||| Sbjct 44834 TCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGCCGTCTTCCAGCTGTTTGCCTGCAAAG 44893 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||||| ||||||||| || || |||||||| Sbjct 44894 ATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTT-ATCCTGGATCTTGGCCTTCACGTTC 44952 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 || || | || || || || || || || |||| |||| || Sbjct 44953 TCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCTGCC 44995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176018544042646