Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq15 134 3e-26
seq23190 125 2e-23
seq4599 100 7e-16
seq2697 98.7 2e-15
seq33 98.7 2e-15
seq7051 93.3 1e-13
seq732 84.2 5e-11
>seq15
Length=680746
Score = 134 bits (148), Expect = 3e-26
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | ||| ||||| || ||||| | ||||| ||||| |||
Sbjct 219393 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 219334
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || |||||| || ||||| ||||||||||| || || ||||||
Sbjct 219333 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACG 219277
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | || || || || ||||| ||||| |||||||| |||||
Sbjct 219276 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 219217
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 219216 ACGAAGATCTGCAT 219203
Score = 134 bits (148), Expect = 3e-26
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | ||| ||||| || ||||| | ||||| ||||| |||
Sbjct 219621 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 219562
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || |||||| || ||||||||||||||||| || || || |||
Sbjct 219561 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTGACG 219505
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | || || || || ||||| ||||| |||||||| |||||
Sbjct 219504 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 219445
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 219444 ACGAAGATCTGCAT 219431
Score = 134 bits (148), Expect = 3e-26
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | ||| ||||| || ||||| | ||||| ||||| |||
Sbjct 219849 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 219790
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || |||||| || ||||||||||||||||| || || |||||
Sbjct 219789 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACA 219733
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | || || || || ||||| ||||| |||||||| |||||
Sbjct 219732 TTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 219673
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 219672 ACGAAGATCTGCAT 219659
>seq23190
Length=44765
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| ||| || ||||| || || ||||| |
Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGAC 17083
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||| | ||| ||| || || || |||||||| | || || | ||
Sbjct 17082 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 17023
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || |||||||| || || || || |||||||| | ||| | || ||
Sbjct 17022 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 16963
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| ||| ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 16962 TTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 16916
>seq4599
Length=129898
Score = 100 bits (110), Expect = 7e-16
Identities = 138/191 (72%), Gaps = 4/191 (2%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | ||||| ||||| |||
Sbjct 43880 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGTTTGCCTGCAAAG 43821
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
| || | ||| | | | ||||| ||||||||||||||||| || || | ||| ||
Sbjct 43820 AGGAGCCTCTGCTTGTCAGC-GGGATGCCTTCTTTATCCTGGATCTTGGCCTGCACATTC 43762
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || ||||| | || || | || ||||| ||||| | |||||| ||||| | |
Sbjct 43761 TC---AGGCTCGCTGGGCTCCACCTTCAGGGTGATGGTCTTGCAGGTCAGGGTCTTCATG 43705
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 43704 AAGATCTGCAT 43694
>seq2697
Length=152082
Score = 98.7 bits (108), Expect = 2e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369
|| ||||| ||||| | ||| || || | || |||| | || || | | || |||
Sbjct 60094 GTACGTCCATCTTCCAGTTGCTTGCCAGTAAAACTCAGTCTTTGCTGGGCAGGAGGAATT 60153
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||| | |||||||| || || || ||||||||||| | ||| | ||| || |||
Sbjct 60154 CCTTCCTCGTCCTGGATCTTGGCCTTTACGTTTTCTATCGTATCCGAGGGTTCGACCTCG 60213
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct 60214 AGAGTGACGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 60257
>seq33
Length=520270
Score = 98.7 bits (108), Expect = 2e-15
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | | || | || || || | ||| || || || |||
Sbjct 39740 TCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAG 39681
Query 288343 ATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | |||| | || | ||||||||||||||||| ||||| || || || ||
Sbjct 39680 ATCAGTCTTTGCTGGTCAGGA---GGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACA 39624
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|||||||| | ||| | ||| || | ||| |||| |||||||| ||||| |||||
Sbjct 39623 TTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCTTC 39564
Query 288460 ACGAATATCTGCAT 288473
||| ||||||||
Sbjct 39563 CTGAAAATCTGCAT 39550
>seq7051
Length=109996
Score = 93.3 bits (102), Expect = 1e-13
Identities = 147/208 (71%), Gaps = 11/208 (5%)
Strand=Plus/Minus
Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327
||||||| ||| || ||||| || || ||||| | || ||||| ||||| | |
Sbjct 16286 AGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCACT 16231
Query 288328 TGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
|| || || || |||||||| | |||| | || | || |||||||| |||||||||
Sbjct 16230 TGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGA---GGAATTCCTTCCTTATCCTGG 16174
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444
|| || || || || |||||| | | ||| | ||| |||| || ||||| ||| ||
Sbjct 16173 ATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAGCTTCAAGAGTGATGGTCATC 16114
Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCA 288472
|| | || ||||| | ||| |||||||
Sbjct 16113 CCTGGAAG-GTCTTCATGAAAATCTGCA 16087
>seq732
Length=284533
Score = 84.2 bits (92), Expect = 5e-11
Identities = 117/163 (72%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| | ||| || || || | || ||| | |||||||| | ||||| ||||| |||
Sbjct 44834 TCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGCCGTCTTCCAGCTGTTTGCCTGCAAAG 44893
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| ||||||| ||||||||| || || ||||||||
Sbjct 44894 ATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTT-ATCCTGGATCTTGGCCTTCACGTTC 44952
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445
|| || | || || || || || || || |||| |||| ||
Sbjct 44953 TCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCTGCC 44995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176018544042646
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |