Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq3026 178 2e-39 seq1118 104 3e-17 >seq3026 Length=153529 Score = 178 bits (196), Expect = 2e-39 Identities = 181/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 9727 ATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGA 9786 ||||| | | | || || |||||||| || || ||||||| || || || ||||| ||| Sbjct 95485 ATTAGCCTACTCGTCTGGAACAACTGTTCATCGTCCCATTCTGGATGCTCATGTTTAAGA 95544 Query 9787 ACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGC 9846 ||||| || || ||||||||||| | |||||| || ||||| |||||||| | ||| ||| Sbjct 95545 ACATCACACACTCTGTTGTGTTCCCGCAGCCAAATTGTGGCATACATCATCAGACCGGGC 95604 Query 9847 ACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCA 9906 || | |||||| ||||| | |||||| ||||| ||||| | || || || | || | Sbjct 95605 ACCAGACCAAAGACTTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGAACATGAGGGGGG 95664 Query 9907 TACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 || | ||| | ||||| || |||||||| ||||| |||||||||||||| |||| Sbjct 95665 TAGATCATCTCGACCTGAGTATCTTTGACTGTGGGAGGATACATTTCACCACCAAT 95720 Score = 141 bits (156), Expect = 1e-28 Identities = 212/301 (70%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 8875 AACTCGGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGT 8934 ||| | ||| | || || ||||| || ||||| || || ||||| |||||||| | Sbjct 93859 AACACTGAATGAGGTAAAAGGACAGCCTTTCACGTTATTGCAGATGAGAGACTGAATTGA 93918 Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994 || || || | ||| | |||||||| || || || || ||||| || ||||||||| | Sbjct 93919 GGCAGTCTTGATGATTTTAAAACCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTACTC 93978 Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054 || || || || || |||| || ||||||||||| || || || || | || | Sbjct 93979 AGGAGAACATATAGGATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCAACTTCTAC 94038 Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAG 9114 ||| |||| || |||||||| | || || || ||||| || | | ||| || || Sbjct 94039 CATGGTCTCCCCAAAGATGGCGTCTGGTCGAGGCTTTTCTACCAGCAGAGCAGGATACAG 94098 Query 9115 TTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACC 9174 || | || || | ||| |||||||| ||||| ||||| ||||| || |||||||| || Sbjct 94099 CTCCATGGCATCAATGTCACCATAGAGCGCTTCTAACTCCGCAGCCATTTCCTTCTCTCC 94158 Query 9175 T 9175 | Sbjct 94159 T 94159 Score = 113 bits (124), Expect = 7e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| | | ||| || |||||||| ||||||||| ||| ||| | || Sbjct 96543 TCTTACCCCATGGCTCTGTCCCGTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 96602 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 |||||| || || ||||| || | || || || ||||||| || |||||||||||||| Sbjct 96603 AAATTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 96662 Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297 ||||| || | || | | || ||||| ||||||| | | ||||||| || || Sbjct 96663 AGGGATGAACTTTCTTCTTAGAAGTACTTTTTCCACAACTTCTTTTGAATCAGGAAG 96719 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 |||||||| || || | || || ||||||||| ||| || ||||| ||| ||| || Sbjct 97152 TCACCTTTGACACCCATGGGTGTTGGGCAGTCATCAGGCACAGGAGGAAGAACTCTGGTG 97211 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || ||||| ||||||||||| || ||||| || | | || || Sbjct 97212 TAATAGGACAGGTTAGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTGCACATTATAAGTT 97271 Query 10507 GGGGGACTGTCAATCA 10522 || || |||||||||| Sbjct 97272 GGCGGGCTGTCAATCA 97287 >seq1118 Length=287336 Score = 104 bits (114), Expect = 3e-17 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || || || || || | || ||||| | || ||||| || ||||| | |||||||||| Sbjct 79224 GTGGCCGTCTTGACAAGGTTGAAACCCATCTCACCGCCAAATGTGCTCGATTTCCAGTAC 79283 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 | || || ||||| ||| | | ||| || || | |||||| |||||||| | || Sbjct 79284 TCTGGAGAACAGATAGGATTCCCTAAGAGGCCCTTAAGGGAAAAAGGAGCCCCAATTTCT 79343 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCA-GTGTA 9111 || || ||||| || ||||||| ||| || || | || | |||| | ||| Sbjct 79344 ATCATACTCTCCCCAAAGATGGAGTTTGGAGAGCACTTCTCAA-GAAGCAGCCCTGGGTA 79402 Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171 ||| || | || |||| ||| ||||| || | ||||| || || || ||||||||||| Sbjct 79403 GAGCTCCAAGGCATCGATGTCCCCATACAGCTCCTCCAAGTCAGCTGCCATCTCCTTCTC 79462 Query 9172 ACCTACAAG 9180 |||||||| Sbjct 79463 TCCTACAAG 79471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721551777043800