Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1971 206 3e-48 seq15 132 5e-26 seq12339 118 1e-21 seq4599 91.5 1e-13 seq732 82.4 8e-11 >seq1971 Length=167910 Score = 206 bits (228), Expect = 3e-48 Identities = 421/619 (68%), Gaps = 10/619 (2%) Strand=Plus/Minus Query 132880 TGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCG 132939 || |||||||||| ||| |||||||| || || || |||||||| ||| ||| ||||| Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487 Query 132940 TTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAA 132999 ||| || || | ||||| ||| || || ||||| |||||||| ||||| | || ||| Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427 Query 133000 CTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTG 133059 || |||||||||| || || | || | || || || | | || ||| |||| Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTA 91367 Query 133060 GCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTTTGACGCACGGCAT 133118 || |||||| |||||| ||||| ||||| || ||| |||||| || || |||| Sbjct 91366 GCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTT-ACACAAGGCAC 91308 Query 133119 CGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTC 133175 || || |||| || || | ||| || | ||| |||| | ||| ||||| Sbjct 91307 TGTCTCACTGGCATTGAAGA---GGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTC 91251 Query 133176 GATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAA 133235 |||||| | |||||| | |||| ||| |||| ||| ||||| ||||| || || Sbjct 91250 AATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAA 91191 Query 133236 GCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAAC-GCTCGACCAGATTTTCGTTGA 133294 | || || || | ||| |||||||| || || | |||| ||| ||||| || | Sbjct 91190 ATAACGGGCTTCCGTAATCTGAACTTCTTG-GCTAAGCCGCTCCACCCAGTTTTCATTTA 91132 Query 133295 CGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGT 133354 | |||| || || || || | || ||||| || | ||||| | ||| | Sbjct 91131 CTATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAG 91072 Query 133355 CGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414 |||| | ||||||| | |||||||||| |||||||||||||| | ||||| | Sbjct 91071 GCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGA 91012 Query 133415 ACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCA 133474 | || | ||| ||||| || ||||| ||| | || ||||| | ||||| || | Sbjct 91011 AGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGA 90952 Query 133475 CAAACCGGCGGGGGTTTTC 133493 |||| |||| |||| |||| Sbjct 90951 CAAAGCGGCAGGGGGTTTC 90933 >seq15 Length=680746 Score = 132 bits (146), Expect = 5e-26 Identities = 166/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 219887 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219946 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 219947 GACACCATCGAGAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 220005 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || ||||||||||| || | ||||||||| |||||||| Sbjct 220006 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 220065 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGG 38467 |||||| || ||| | || ||||| |||| ||||| ||||| || Sbjct 220066 CATCCAGAAAGAATCCACTCTGCACCTGGTCCTGCGCTTGAGGGG 220110 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| || ||||| || || ||| | ||||| Sbjct 219491 GACACCATCGAGAACG-TCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCA 219549 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || |||||||||||||| || | ||||| ||| || ||||| Sbjct 219550 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219609 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || |||| ||||| | || || ||| |||| || || Sbjct 219610 CATCCAGAAAGAGTCGACCCTGCACCTTGTCCTCCGTCTGAGGGGTGG 219657 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 219203 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219262 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| || || || || || ||| | ||||| Sbjct 219263 GACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCA 219321 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || |||||||||||||| || | ||||| ||| || ||||| Sbjct 219322 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219381 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || |||| ||||| | || || ||| |||| || || Sbjct 219382 CATCCAGAAAGAGTCGACCCTGCACCTTGTCCTCCGTCTGAGGGGTGG 219429 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| || ||||| || || ||| | ||||| Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219778 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || |||||||||||||| || | ||||| ||| || |||||| Sbjct 219779 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219838 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 ||||| || || |||| ||||| | || || ||| |||| Sbjct 219839 ATCCAGAAAGAGTCGACCCTGCACCTTGTCCTCCGTCTGAG 219879 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || || ||||||||| | || || ||| ||| Sbjct 218974 AATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 219033 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| || |||||||| || || | |||| Sbjct 219034 TGACACCATCGAGAACG-TCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCACCAGACC 219092 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | || || | || || ||||||||||| || | ||||||||| ||||||| Sbjct 219093 AGCAGAGACTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACA 219152 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| || || | || ||||| |||| || || | ||||| || Sbjct 219153 ACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGAGGTGG 219201 >seq12339 Length=50223 Score = 118 bits (130), Expect = 1e-21 Identities = 166/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 7733 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 7674 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || ||| || || || || || ||| | ||||| Sbjct 7673 GACACCATCGAGAACG-TGAAGGCCAAGATCAG-GATAAGGAAGGCATCCCCCCTGACCA 7616 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || |||||||||||||| || | ||||| ||| || ||||| Sbjct 7615 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 7556 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || |||| ||||| |||| || ||| |||| || ||| Sbjct 7555 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGGC 7507 >seq4599 Length=129898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||| | || || || || |||| ||||||||| | | || ||| ||| | Sbjct 43694 ATGCAGATCTTCATGAAGACCCTGACCTGCAAGACCATCACCCTGAAGGTGGAGCCCAGC 43753 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || || || || | | | | || |||| || ||||| || || ||||| ||| | Sbjct 43754 GA--GCCTGAGAATG-TGCAGGCCAAGATCCAGGATAAAGAAGGCAT-CCCGCTGACAAG 43809 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||| | | || ||||||||| |||| || | ||||| || || |||||| Sbjct 43810 CAGAGGCTCCTCTTTGCAGGCAAACAGATGGAAGATGGCCGCACTCTTTCTGATTACAAC 43869 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || |||| ||||| |||| || || |||| || ||| Sbjct 43870 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCTGTCTGAGGGGTGGC 43917 >seq732 Length=284533 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 38277 ACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCT 38335 ||| ||||| | || || ||| ||| |||| | | | |||| | || | || |||| Sbjct 44990 ACCGTCACCCTGGAGGTGGAGTCCAGTGACACCATCGAGAACG-TGAAGGCCAAGATCCA 44932 Query 38336 CGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 || || || || || ||| | ||||| ||| ||||||| | || |||||||||||||| Sbjct 44931 GGATAA-GAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGA 44873 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||| | ||| || || ||||||||| | || || | || |||||| |||| || Sbjct 44872 AGACGGCCACACTCTTTCTGATTACAACATCTAGAAAGAGTCAACACTGCATCTGGTCCT 44813 Query 38456 GCGTTTGAGAGGCGGC 38471 | | |||| || ||| Sbjct 44812 CCATCTGAGGGGTGGC 44797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498668799146880