Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq695 105 3e-17 seq24761 91.5 6e-13 seq23190 91.5 6e-13 seq2586 89.7 2e-12 seq2697 87.8 7e-12 seq314 87.8 7e-12 seq7051 84.2 9e-11 >seq695 Length=314085 Score = 105 bits (116), Expect = 3e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 128318 GTTACTCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 128259 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| || |||||| | | || || ||||| || Sbjct 128258 AAAGATGCTGGAACTATTGCTGGGTTGAATGTTATGAGGATCATCAATGAGCC 128206 >seq24761 Length=36067 Score = 91.5 bits (100), Expect = 6e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| || || ||||| || || || || ||||| || |||||| | || |||| Sbjct 10749 ATTTTCGTGAAGACCCTGACAGG-AAGACCATCACTCTCGAGGTTGAACCCTCGGATACA 10691 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || ||| | | || || || || || |||||||||||| | ||||| || || | Sbjct 10690 ATAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGCAGAGA 10631 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || | || || ||||| ||||||||| | |||||| || || || ||| | Sbjct 10630 CTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACATTCAA 10571 Query 391236 AAGGATGCAACACTTCACTTAGTATTAAGACT 391267 |||| | || ||||| | || || ||||| Sbjct 10570 AAGGGGTCCACTCTTCATATTGTGTTGAGACT 10539 >seq23190 Length=44765 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || ||||| | || || | || Sbjct 16916 ATGCAGATATTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCAAGGTCAAACCCTCG 16975 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || || |||||||||||||||||||| || Sbjct 16976 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAC 17035 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || |||| ||| ||||| | ||| || |||| || || Sbjct 17036 CAAAGACTGATCTTTGCTGGCAAGCAACGGGAAAATGGACGTACTCTGTCGGACTACAAC 17095 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 17096 ATTCAAAAGGAGCCCACTCTTCATCTTGTGTTGAGACT 17133 >seq2586 Length=172570 Score = 89.7 bits (98), Expect = 2e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| || || | ||| || || || || ||||| || || ||| | || ||| Sbjct 46893 ATTTTCGTGAAGACCCAGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGGATGCA 46834 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 | ||| | || || || || || |||||||||||||||||||| || ||| | Sbjct 46833 GTAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAAAGA 46774 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || | || || ||||| ||||||||| | |||||| | || || || ||| | Sbjct 46773 CTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAG 46714 Query 391236 AAGGATGCAACACTTCA 391252 ||||| | || ||||| Sbjct 46713 AAGGAGTCCACTCTTCA 46697 >seq2697 Length=152082 Score = 87.8 bits (96), Expect = 7e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || | ||||| || || ||| | || Sbjct 60257 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCGTCACTCTCGAGGTCGAACCCTCG 60198 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | || || || || || |||||||||||||||||| || Sbjct 60197 GATACGATAGAAAACGTAAAGGCCAAGATCCAGGACGAGGAAGGAATTCCTCCTGCCCAG 60138 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | | ||| | || || ||||| ||||||||| | |||||| | || | || Sbjct 60137 CAAAGACTGAGTTTTACTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAACACAAC 60078 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 | ||| ||||| | | ||||| | || || ||||| Sbjct 60077 ACTGAAAAGGAGTCCATCCTTCATCTTGTGTTGAGACT 60040 >seq314 Length=385895 Score = 87.8 bits (96), Expect = 7e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| ||||| | ||||||||||| Sbjct 359860 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 359801 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 359800 ACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 359760 >seq7051 Length=109996 Score = 84.2 bits (92), Expect = 9e-11 Identities = 131/186 (70%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 391083 ACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAA 391142 || || |||||||| | |||| | || |||| | ||| | | || || || || Sbjct 16118 ACCATCACTCTTGAAGCTGAACCCTCAGATACAACAGAAAATGTAAAGGCCAAGATCCAG 16177 Query 391143 GATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAA 391202 ||||||||||||||||||||||| || ||| | | || || | || || ||| | ||| Sbjct 16178 GATAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTTGCTGGCAAGCAAGTGGAA 16237 Query 391203 GATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCA-CTTAGTATT 391261 |||||| | ||||| || || || ||| | ||||| | || ||||| |||| | || Sbjct 16238 GATGGACGTACTTT----GACTACAACATTCAAAAGGAGTCCACTCTTCATCTTAATGTT 16293 Query 391262 AAGACT 391267 ||||| Sbjct 16294 GAGACT 16299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1969628966082156