Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq24026 132 6e-26 seq16729 107 2e-18 >seq24026 Length=55830 Score = 132 bits (146), Expect = 6e-26 Identities = 178/248 (72%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266 ||||| |||| | || || | ||||| || |||| | ||| ||| ||| ||||| Sbjct 41288 ACTGAGGAACTTACAAGTTGTCCCTCACACCAAATGGTCTAATAATAGGACCTGTGAGAT 41347 Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326 || |||||||| ||||| ||| |||| ||||| ||||||| |||| ||| ||| || Sbjct 41348 CCTCCTGACCTGCTCTGTGGAGAATCCAAATGATAACATCTTATTCAGGTGGCAGGTCTC 41407 Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386 || || || |||| | | || | ||||| || | |||||||||||||| || || Sbjct 41408 AGGAAACACACTTCAAAGTGAAGCAAACCTTACTATCTCCTGGGACCCCAAGAGTTTCAA 41467 Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTC 2446 ||| ||| |||||| ||| | || || || ||||| |||||| || ||| | ||||| Sbjct 41468 TGAAGAGACCTACACCTGCGTAGCTGAGAATGCTGTCAGCAATTCATCCTTCTCTGTCTC 41527 Query 2447 GGCCCAGA 2454 | ||||| Sbjct 41528 TGTCCAGA 41535 Score = 116 bits (128), Expect = 5e-21 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937 || || ||||||||||| ||||| |||| ||||||||||| || |||||||| |||||| Sbjct 38207 GTTTCACAAACCAGCTCAACCCCATTGATTGTGAATGGGGTCCTGGGGGAGTCTGTAACA 38266 Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGC 1986 || ||||| | ||||| | || |||||||||| |||||||||||||| Sbjct 38267 CTTACCCTGAAGTTTCCTGTGGAAGAGAAGATCACGTCCATCACCTGGC 38315 >seq16729 Length=97091 Score = 107 bits (118), Expect = 2e-18 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937 || || ||||||||||| ||||| |||| ||||| ||||| || |||||||| ||||| Sbjct 57653 GTTTCACAAACCAGCTCAACCCCATTGATTGTGAACGGGGTCCTGGGGGAGTCTGTAACT 57594 Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGC 1986 || ||||| | ||||| | || |||||||||| |||||||||||||| Sbjct 57593 CTCACCCTGAAGTTTCCTGTGGAAGAGAAGATCACGTCCATCACCTGGC 57545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627390969015720