Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq24026 132 6e-26
seq16729 107 2e-18
>seq24026
Length=55830
Score = 132 bits (146), Expect = 6e-26
Identities = 178/248 (72%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266
||||| |||| | || || | ||||| || |||| | ||| ||| ||| |||||
Sbjct 41288 ACTGAGGAACTTACAAGTTGTCCCTCACACCAAATGGTCTAATAATAGGACCTGTGAGAT 41347
Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326
|| |||||||| ||||| ||| |||| ||||| ||||||| |||| ||| ||| ||
Sbjct 41348 CCTCCTGACCTGCTCTGTGGAGAATCCAAATGATAACATCTTATTCAGGTGGCAGGTCTC 41407
Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386
|| || || |||| | | || | ||||| || | |||||||||||||| || ||
Sbjct 41408 AGGAAACACACTTCAAAGTGAAGCAAACCTTACTATCTCCTGGGACCCCAAGAGTTTCAA 41467
Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTC 2446
||| ||| |||||| ||| | || || || ||||| |||||| || ||| | |||||
Sbjct 41468 TGAAGAGACCTACACCTGCGTAGCTGAGAATGCTGTCAGCAATTCATCCTTCTCTGTCTC 41527
Query 2447 GGCCCAGA 2454
| |||||
Sbjct 41528 TGTCCAGA 41535
Score = 116 bits (128), Expect = 5e-21
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937
|| || ||||||||||| ||||| |||| ||||||||||| || |||||||| ||||||
Sbjct 38207 GTTTCACAAACCAGCTCAACCCCATTGATTGTGAATGGGGTCCTGGGGGAGTCTGTAACA 38266
Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGC 1986
|| ||||| | ||||| | || |||||||||| ||||||||||||||
Sbjct 38267 CTTACCCTGAAGTTTCCTGTGGAAGAGAAGATCACGTCCATCACCTGGC 38315
>seq16729
Length=97091
Score = 107 bits (118), Expect = 2e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937
|| || ||||||||||| ||||| |||| ||||| ||||| || |||||||| |||||
Sbjct 57653 GTTTCACAAACCAGCTCAACCCCATTGATTGTGAACGGGGTCCTGGGGGAGTCTGTAACT 57594
Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGC 1986
|| ||||| | ||||| | || |||||||||| ||||||||||||||
Sbjct 57593 CTCACCCTGAAGTTTCCTGTGGAAGAGAAGATCACGTCCATCACCTGGC 57545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627390969015720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |