Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1971 167 3e-36 seq4569 107 2e-18 seq2230 107 2e-18 >seq1971 Length=167910 Score = 167 bits (184), Expect = 3e-36 Identities = 308/449 (69%), Gaps = 2/449 (0%) Strand=Plus/Minus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||| ||||| |||||||| || ||||| || || | |||||| Sbjct 91544 TTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATT 91485 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| || | || | ||| | |||| ||| || | ||| ||||| | ||||||||| Sbjct 91484 GGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGA 91425 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 ||||||||||| || ||||| |||| |||| ||||| | | || ||| | || | Sbjct 91424 ACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTAGC 91365 Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402 | || |||| | |||||||||| || ||||| | ||| Sbjct 91364 CTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCACTGT 91305 Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462 ||| | || || ||||| || | |||||| |||| | || ||||| ||||| || Sbjct 91304 CTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAG 91245 Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522 | ||| | ||||||| | || || ||||| | || || || || ||||| ||| | | Sbjct 91244 GAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAATAACG 91185 Query 37523 AGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 ||||| | |||| ||||| || | || || || | |||||||||| ||||| | Sbjct 91184 GGCTTCCG-TAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTATGC 91126 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACA 37610 |||||| |||||| ||||||| |||||| Sbjct 91125 TATCACTTGCTGCAGAGAAAGCCAGAACA 91097 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 || ||||| || || | |||||| ||||| || | || ||||| | |||| |||||| Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| ||||| | ||||||||| ||||||||||| || ||||| ||||| ||||| ||| Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481 Query 37320 ACAAGACGT 37328 || | |||| Sbjct 88480 ACGACACGT 88472 Score = 82.4 bits (90), Expect = 9e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||||| | ||||| || || |||| |||| || || || || ||||| |||| Sbjct 91997 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 91939 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| ||||| |||||||| ||||||||||| Sbjct 91938 CCAGTGAAATATTCTCCATAAAGTCAAATGGATT 91905 >seq4569 Length=138791 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| ||||| || | ||| ||||| | |||||||| | Sbjct 31093 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 31034 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 31033 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 30974 Query 37318 CTAC 37321 | || Sbjct 30973 CCAC 30970 >seq2230 Length=225668 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||| ||||| |||||||| || ||||| || || | ||||| Sbjct 225102 TTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGATCATT 225043 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| || | || | ||| | |||| ||| || | ||| ||||| | ||||||||| Sbjct 225042 GGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGA 224983 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321 ||||||||||| || ||||| |||| |||| ||||| Sbjct 224982 CCCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTAC 224944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590535725594280