Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq4260 147 2e-30
seq4304 132 4e-26
seq3042 102 7e-17
>seq4260
Length=133197
Score = 147 bits (162), Expect = 2e-30
Identities = 131/164 (80%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || |||| ||| || |||||||| ||||| || | |||||||||||||||||||||
Sbjct 112047 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGC 111988
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || || |||||||| || ||||||||||| ||||| || || ||||| |||| |
Sbjct 111987 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 111928
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032
||||| ||||| || | || |||||||| || || ||||||||
Sbjct 111927 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATGAG 111884
Score = 87.8 bits (96), Expect = 1e-12
Identities = 120/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| || || || |||||||||||||| || || || || || || | ||
Sbjct 108828 CATCTCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATC 108769
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
|| ||| | ||| ||| ||| ||||||| ||||||| ||| || || || ||
Sbjct 108768 CCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTAGCATC 108709
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
|||||| || || ||||| || ||||| || | ||||||||| ||
Sbjct 108708 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 108661
>seq4304
Length=228172
Score = 132 bits (146), Expect = 4e-26
Identities = 348/525 (66%), Gaps = 12/525 (2%)
Strand=Plus/Minus
Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824
||||||||| || | || | || ||||| | |||||| | || | |||||| ||||
Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885
Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884
| | || || ||||||| ||||| ||| | || || || | || || |||| ||| |
Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825
Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944
| |||||||| ||||| || | |||||||||||||| |||| || | || ||| |||
Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765
Query 29945 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30004
| || ||| ||||||| ||||| || || || || || ||||||| || || || |
Sbjct 2764 CTCCTGACTTCTGGTACAGCTG-CAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAA 2707
Query 30005 TGGTGTGGCACGGAGGAA-------GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30057
|| |||||| | || | | | ||||| | ||||| | ||||| ||
Sbjct 2706 GGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTT-CGATTCCAAGCA 2648
Query 30058 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30117
| | ||||| | |||||||| ||||| | |||| ||| | | ||||||||
Sbjct 2647 CGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGT 2588
Query 30118 TGATCCACCCCCATCCCCGAGT-AGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30176
|| || || || || || | | | | || || |||| || || | ||| |
Sbjct 2587 TGGTCTACTCCTTGACCTGAATAAATTTAAATCCACATCTTTGTATTCGGCCACCAAAAG 2528
Query 30177 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30236
||||||||| || | || || | || | | || ||||| ||| || ||
Sbjct 2527 CCTCCACTGAAAGCTATAAACTAGGCCTAAATTCCCTTCTTCTCTGGTGGAGAGTACCAG 2468
Query 30237 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281
||||||| ||||||| ||| |||| ||| |||||||| || ||
Sbjct 2467 GCTGTCCAAGAAGTCTCGGGACCCGTAGGCATCCCAGATTTTCAC 2423
>seq3042
Length=197541
Score = 102 bits (112), Expect = 7e-17
Identities = 116/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139
||||||||| || || || || || || || ||||| |||| || || ||||| ||
Sbjct 153744 ATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTC-CT 153802
Query 112140 C-AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 112198
| | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| |
Sbjct 153803 CTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 153862
Query 112199 TCTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231
|||| || ||| |||||||| || | |||||
Sbjct 153863 TCTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 153895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 407419619644961
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |