Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3027 174 3e-38
seq6553 150 3e-31
seq1971 105 1e-17
seq4309 93.3 8e-14
seq2230 93.3 8e-14
>seq3027
Length=186816
Score = 174 bits (192), Expect = 3e-38
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448
|||| ||||| | || | ||| || ||||| ||||||||| ||||||||||| || |
Sbjct 14479 GCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGCTCGC 14538
Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508
| || | | || || ||||||| || ||||| || | |||||| |||||| || |
Sbjct 14539 GGAGGAGGCCGGCAGTGCTGGACAGCCCGGCGTTCTCGGCCTTGAGTGTCTTCACCTTGT 14598
Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568
||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| ||||
Sbjct 14599 CCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGCCGGT 14658
Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|||| || | ||| || || | |||||||| |||||||| ||||||| ||| || |||
Sbjct 14659 TCCGCAGCCGCTTGCGCTCTACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGGGAC 14717
>seq6553
Length=80819
Score = 150 bits (166), Expect = 3e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| || |||||||| || ||||| | | ||| || | |||
Sbjct 66984 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGC 66925
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | | ||||||| ||||||||||||||| || |||| |||||| |||||
Sbjct 66924 TCCGTGTTCTGACTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 66865
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| |||||| |||| ||| || | |||||| || || | ||| || ||||||||
Sbjct 66864 TTGCGCTTGCGGCACTTGGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 66805
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| ||||| ||||||||||| || |||
Sbjct 66804 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 66772
>seq1971
Length=167910
Score = 105 bits (116), Expect = 1e-17
Identities = 197/286 (69%), Gaps = 5/286 (2%)
Strand=Plus/Minus
Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150
||| || ||||||| ||||||| ||| | | || |||||||||||| | ||| ||
Sbjct 91568 CTCCGAAGGTTTGTGTAGCAGGTGTTTGA---ACATCAGGCAGGCAAAGTCACAGTGTAA 91512
Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210
|| ||||| | ||| || || | ||||| || ||| || | ||| | || | |
Sbjct 91511 ACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTT 91452
Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270
|||||||| || || | || ||||| ||||| |||||||| || ||| |||| | ||
Sbjct 91451 CTTGAGCCACAATATAGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAA 91392
Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGT 48329
|| || |||||| | | ||| | |||||| ||||| | | ||| ||||| |
Sbjct 91391 GGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGCGCAAG-GCCCAAT 91333
Query 48330 CTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375
||||| |||||| | || |||| ||||| |||| ||||||
Sbjct 91332 CTGCCGCCTTCTTTACACAAGGCACTGTCTCACTGGCATTGAAGAG 91287
>seq4309
Length=150349
Score = 93.3 bits (102), Expect = 8e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||| ||||| | ||||| || | ||||| |||| |||
Sbjct 31991 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 32050
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | ||||||||||| || |||||| ||||||||||
Sbjct 32051 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 32110
Query 241619 ATCGGAGAC 241627
|| || |||
Sbjct 32111 ATGGGGGAC 32119
>seq2230
Length=225668
Score = 93.3 bits (102), Expect = 8e-14
Identities = 185/271 (68%), Gaps = 5/271 (2%)
Strand=Plus/Minus
Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150
||| || |||||| ||||||| ||| | | || |||||||||||| | ||| ||
Sbjct 225126 CTCCGAATGTTTGTGTAGCAGGTGTTTGA---ACATCAGGCAGGCAAAGTCACAGTGTAA 225070
Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210
|| ||||| | ||| || || | ||||| || ||| || | ||| | || | |
Sbjct 225069 ACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTT 225010
Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270
|||||||| || || | || ||||| ||||| |||||||| || ||| |||| | ||
Sbjct 225009 CTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACAAA 224950
Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGT 48329
|| || |||||| | | ||| | |||||| ||||| | | ||| | ||| |
Sbjct 224949 GGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGCGCAAG-GTCCAAT 224891
Query 48330 CTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360
||||| |||||| | || |||| |||||
Sbjct 224890 CTGCCGCCTTCTTTACACAGGGCACTGTCTC 224860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928731715802880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |