Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3027 174 3e-38 seq6553 150 3e-31 seq1971 105 1e-17 seq4309 93.3 8e-14 seq2230 93.3 8e-14 >seq3027 Length=186816 Score = 174 bits (192), Expect = 3e-38 Identities = 182/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| | || | ||| || ||||| ||||||||| ||||||||||| || | Sbjct 14479 GCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGCTCGC 14538 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 | || | | || || ||||||| || ||||| || | |||||| |||||| || | Sbjct 14539 GGAGGAGGCCGGCAGTGCTGGACAGCCCGGCGTTCTCGGCCTTGAGTGTCTTCACCTTGT 14598 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 ||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| |||| Sbjct 14599 CCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGCCGGT 14658 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||| || | ||| || || | |||||||| |||||||| ||||||| ||| || ||| Sbjct 14659 TCCGCAGCCGCTTGCGCTCTACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGGGAC 14717 >seq6553 Length=80819 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| || |||||||| || ||||| | | ||| || | ||| Sbjct 66984 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGC 66925 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | ||||||| ||||||||||||||| || |||| |||||| ||||| Sbjct 66924 TCCGTGTTCTGACTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 66865 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 |||||| |||||| |||| ||| || | |||||| || || | ||| || |||||||| Sbjct 66864 TTGCGCTTGCGGCACTTGGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 66805 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 66804 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 66772 >seq1971 Length=167910 Score = 105 bits (116), Expect = 1e-17 Identities = 197/286 (69%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 ||| || ||||||| ||||||| ||| | | || |||||||||||| | ||| || Sbjct 91568 CTCCGAAGGTTTGTGTAGCAGGTGTTTGA---ACATCAGGCAGGCAAAGTCACAGTGTAA 91512 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || ||||| | ||| || || | ||||| || ||| || | ||| | || | | Sbjct 91511 ACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTT 91452 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 |||||||| || || | || ||||| ||||| |||||||| || ||| |||| | || Sbjct 91451 CTTGAGCCACAATATAGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAA 91392 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGT 48329 || || |||||| | | ||| | |||||| ||||| | | ||| ||||| | Sbjct 91391 GGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGCGCAAG-GCCCAAT 91333 Query 48330 CTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 ||||| |||||| | || |||| ||||| |||| |||||| Sbjct 91332 CTGCCGCCTTCTTTACACAAGGCACTGTCTCACTGGCATTGAAGAG 91287 >seq4309 Length=150349 Score = 93.3 bits (102), Expect = 8e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| Sbjct 31991 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 32050 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| |||||||||| Sbjct 32051 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 32110 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 32111 ATGGGGGAC 32119 >seq2230 Length=225668 Score = 93.3 bits (102), Expect = 8e-14 Identities = 185/271 (68%), Gaps = 5/271 (2%) Strand=Plus/Minus Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 ||| || |||||| ||||||| ||| | | || |||||||||||| | ||| || Sbjct 225126 CTCCGAATGTTTGTGTAGCAGGTGTTTGA---ACATCAGGCAGGCAAAGTCACAGTGTAA 225070 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || ||||| | ||| || || | ||||| || ||| || | ||| | || | | Sbjct 225069 ACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTT 225010 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 |||||||| || || | || ||||| ||||| |||||||| || ||| |||| | || Sbjct 225009 CTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACAAA 224950 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGT 48329 || || |||||| | | ||| | |||||| ||||| | | ||| | ||| | Sbjct 224949 GGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGCGCAAG-GTCCAAT 224891 Query 48330 CTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 ||||| |||||| | || |||| ||||| Sbjct 224890 CTGCCGCCTTCTTTACACAGGGCACTGTCTC 224860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928731715802880