Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1971 104 4e-17 seq2230 95.1 2e-14 seq4569 87.8 3e-12 >seq1971 Length=167910 Score = 104 bits (114), Expect = 4e-17 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 |||| ||||||| || || | | |||||||||| || | ||| || ||||| || Sbjct 91361 AGAG-GCTACGTACGGAGAACCTGTCGTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTT 91419 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTAC 25977 ||||| ||||| | || || ||||||||| | | | |||| ||| |||| || Sbjct 91420 CTGGTTCTTTTGCATCTATATTGTGGCTCAAGAA-ACGAGGACTGATGGCCGGCCTCACA 91478 Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037 |||||||| || || || ||||| ||||||||| | ||| | || |||||||||||| | Sbjct 91479 TTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATG 91538 Query 26038 TACACGGGCCACTTGCTCCACAAACCTTC 26066 | || ||| |||| ||||||||||| Sbjct 91539 TTCA---AACACCTGCTACACAAACCTTC 91564 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||||||||||||| ||||| || ||||| || ||||| ||||| | || |||||| Sbjct 88479 GTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 88538 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||||| | | | |||| |||||||| || |||||||| || || || ||||| || Sbjct 88539 CTCAA-AAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 88597 Query 26004 CGAGG 26008 ||||| Sbjct 88598 CGAGG 88602 >seq2230 Length=225668 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 |||| ||||||| || || | | |||||||||| || | ||| || ||||| || Sbjct 224919 AGAG-GCTACGTACGGAGAACCTGTCGTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTT 224977 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTAC 25977 || || ||||| | || || ||||||||| | | | |||| ||| |||| || Sbjct 224978 CTGGGTCTTTTGCATCTATATTGTGGCTCAAGAA-ACGAGGACTGATGGCCGGCCTCACA 225036 Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037 |||||||| || || || ||||| ||||||||| | ||| | || |||||||||||| | Sbjct 225037 TTTTCCAATGATCTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATG 225096 Query 26038 TACACGGGCCACTTGCTCCACAAACCTTC 26066 | || ||| |||| ||||||| ||| Sbjct 225097 TTCA---AACACCTGCTACACAAACATTC 225122 >seq4569 Length=138791 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/129 (78%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939 || |||| |||||||||||||| || || || || ||| || || ||||| || || | Sbjct 30965 GGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATAT 31024 Query 25940 TCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAG 25997 ||||||| ||| | ||| |||| ||||| || || ||| |||||||| || |||||||| Sbjct 31025 TCTGGCTAAAG-AAAAGAGGACTTATGCCTGGACT-TACTTTTTCCAATGAACTCATCAG 31082 Query 25998 CAGGGACGA 26006 ||| || || Sbjct 31083 CAGAGATGA 31091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926051798518080