Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1971 104 4e-17
seq2230 95.1 2e-14
seq4569 87.8 3e-12
>seq1971
Length=167910
Score = 104 bits (114), Expect = 4e-17
Identities = 151/209 (72%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918
|||| ||||||| || || | | |||||||||| || | ||| || ||||| ||
Sbjct 91361 AGAG-GCTACGTACGGAGAACCTGTCGTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTT 91419
Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTAC 25977
||||| ||||| | || || ||||||||| | | | |||| ||| |||| ||
Sbjct 91420 CTGGTTCTTTTGCATCTATATTGTGGCTCAAGAA-ACGAGGACTGATGGCCGGCCTCACA 91478
Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037
|||||||| || || || ||||| ||||||||| | ||| | || |||||||||||| |
Sbjct 91479 TTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATG 91538
Query 26038 TACACGGGCCACTTGCTCCACAAACCTTC 26066
| || ||| |||| |||||||||||
Sbjct 91539 TTCA---AACACCTGCTACACAAACCTTC 91564
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/125 (76%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|||||||||||||| ||||| || ||||| || ||||| ||||| | || ||||||
Sbjct 88479 GTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 88538
Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003
||||| | | | |||| |||||||| || |||||||| || || || ||||| ||
Sbjct 88539 CTCAA-AAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGA 88597
Query 26004 CGAGG 26008
|||||
Sbjct 88598 CGAGG 88602
>seq2230
Length=225668
Score = 95.1 bits (104), Expect = 2e-14
Identities = 149/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918
|||| ||||||| || || | | |||||||||| || | ||| || ||||| ||
Sbjct 224919 AGAG-GCTACGTACGGAGAACCTGTCGTAGCCTTTGTCGCAGCGGAAGGAATCTTCTTTT 224977
Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTAC 25977
|| || ||||| | || || ||||||||| | | | |||| ||| |||| ||
Sbjct 224978 CTGGGTCTTTTGCATCTATATTGTGGCTCAAGAA-ACGAGGACTGATGGCCGGCCTCACA 225036
Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037
|||||||| || || || ||||| ||||||||| | ||| | || |||||||||||| |
Sbjct 225037 TTTTCCAATGATCTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATG 225096
Query 26038 TACACGGGCCACTTGCTCCACAAACCTTC 26066
| || ||| |||| ||||||| |||
Sbjct 225097 TTCA---AACACCTGCTACACAAACATTC 225122
>seq4569
Length=138791
Score = 87.8 bits (96), Expect = 3e-12
Identities = 100/129 (78%), Gaps = 4/129 (3%)
Strand=Plus/Plus
Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939
|| |||| |||||||||||||| || || || || ||| || || ||||| || || |
Sbjct 30965 GGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATAT 31024
Query 25940 TCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAG 25997
||||||| ||| | ||| |||| ||||| || || ||| |||||||| || ||||||||
Sbjct 31025 TCTGGCTAAAG-AAAAGAGGACTTATGCCTGGACT-TACTTTTTCCAATGAACTCATCAG 31082
Query 25998 CAGGGACGA 26006
||| || ||
Sbjct 31083 CAGAGATGA 31091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 926051798518080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |