Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_019711.1
Length=47288
Score E
Sequences producing significant alignments: (Bits) Value
seq160350 100 9e-17
seq43519 95.1 4e-15
seq66846 82.4 2e-11
>seq160350
Length=484
Score = 100 bits (110), Expect = 9e-17
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 6858 CGAAAAACTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAGTCAGCAC 6917
|||||||||| ||| | |||| ||||||||||| || |||||||||||||| | | | |
Sbjct 135 CGAAAAACTGTGTGCCTTCCGGGGATCCGGCGCGCGAATTCACCATGATTCAATAAACTC 194
Query 6918 CGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCCGTACAACTGG 6965
|||||||||||||| | |||||||| | ||| | ||| | ||||||
Sbjct 195 CGCTGATGCTGCTGCCAGACCCTGACGCATTCATCTCCTTCAAACTGG 242
>seq43519
Length=5290
Score = 95.1 bits (104), Expect = 4e-15
Identities = 173/251 (69%), Gaps = 17/251 (7%)
Strand=Plus/Plus
Query 6900 CCATGATTCAGTCAGCACCGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCCGTAC 6959
|||||||||||||||| ||||||||||||||| | |||||||| | ||||| |||||
Sbjct 186 CCATGATTCAGTCAGCTCCGCTGATGCTGCTGCCAGACCCTGACGCATTCGTCTCCGTCA 245
Query 6960 AACTGGCGTAA--TC-----ATGGCCCTTCGGGGCCATTGTTTCTCTGTGGAGGAGT--C 7010
||||||| ||| || ||||||| |||||| || | ||||| | | |
Sbjct 246 AACTGGCATAACTTCCCCCAGTGGCCCTGTCGGGCCA-----CCTTTCTGGAGTATTTCC 300
Query 7011 CATGAC---GAAAGATGAACTGATTGCCCGTCTCCGCTCGCTGGGTGAACAACTGAACCG 7067
|||||| |||||| | ||||| || || || || || || || |||||
Sbjct 301 CATGACAGAGAAAGAAAAGCTGATCGCTCGCCTGAATGACCTTGGCACTCATCTTAACCG 360
Query 7068 TGATGTCAGCCTGACGGGGACGAAAGAAGAACTGGCGCTCCGTGTGGCAGAGCTGAAAGA 7127
|| |||||| | || |||| | ||||| || | ||| | || |||||| ||||
Sbjct 361 CGAGGTCAGCACCAGCGGTACGATTCAGGAACTTACGATGCGTATTGCTGAGCTGGAAGA 420
Query 7128 GGAGCTTGATG 7138
|||| | ||||
Sbjct 421 GGAGTTGGATG 431
>seq66846
Length=6270
Score = 82.4 bits (90), Expect = 2e-11
Identities = 80/102 (78%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 6856 CCCGAAAAACTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAGTCAGC 6915
|||||||||||||||| | | || |||||| ||| || |||||||||||||| |
Sbjct 6037 CCCGAAAAACTGGGTGCCGTCGGGGAATCCGGGGCGCGAAGA-ACCATGATTCAGTCCTC 5979
Query 6916 ACCGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCCGT 6957
||| ||||||||||| | ||||||| || ||||| |||||
Sbjct 5978 TCCGGTGATGCTGCTGCCAGACCCTGTTGCATTCGTCTCCGT 5937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150768079906500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |