Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq11145 363 2e-95
seq6540 178 1e-39
seq9961 107 2e-18
>seq11145
Length=73809
Score = 363 bits (402), Expect = 2e-95
Identities = 678/988 (69%), Gaps = 17/988 (2%)
Strand=Plus/Minus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
|||||| || |||| ||| |||| ||| || | ||| | ||| |||||| || || ||
Sbjct 31171 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCGATGTCCGTGTCGAACTTGTTGGC 31112
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
||||| ||||| | | || ||||||| || ||| || | ||||| ||||| ||
Sbjct 31111 GAACAAGTGGTGCACACGC---AGCATCCAGTTCAAGTCACCCGCTCCGAAAACGCACAC 31055
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
||| || | ||| |||||| |||| |||||||| | || || || | | |||||||||
Sbjct 31054 GGAGCGCACGTGGACGCCGCTGCACGGCGGGTAGGGGGCGCCCTTGGAAATGTCACCTTC 30995
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
||||||||||||| ||||||||||| || || ||||||||||| | ||||| || |
Sbjct 30994 AAAGTACTGCCACTTGACAAACCTGGCAATTGCTTGCATGTCGGACATATCGTACTTATG 30935
Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351
| | || | | || || || |||| || | ||| | |||||||| || | ||
Sbjct 30934 GCTTAAGGACAGTGACCCTGGGACTTCGGGGATCCTCTGAATAGTGGCCCAGAGATACTC 30875
Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAAC-CTGTCCCGCA 160410
||| |||||||| ||||| || | ||| ||||| |||| | ||| | || || |
Sbjct 30874 GTCCGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGTATTTTTTCATTCTCG-A 30816
Query 160411 GAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTA 160470
| || | || || || | || ||||| || || ||||| || || | |||
Sbjct 30815 GCACATACTCCACATACCTCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTG 30756
Query 160471 TGGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGC 160529
| | ||| || ||| ||| ||| || |||| | || | ||| ||||| |
Sbjct 30755 TTTCAAGAGGAGGA-TGTATTTTGTCGGTCCCCATGTTTGTCAACTTTCCATTCACGACT 30697
Query 160530 GCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTG 160589
|| | |||| |||||||| | | || | | |||||| | ||||| ||||| |
Sbjct 30696 GCATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATTCTCTCCGTTTCTAGGTTA 30637
Query 160590 TTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAG 160649
|| | || | ||| || |||| | |||| || || ||||| || || | |||||
Sbjct 30636 TTCTCGCCCATTAACGACTTGAGCTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAA 30577
Query 160650 TCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTC 160709
|| ||||||| | ||||||| ||||||||| | ||| ||| || |||||| |
Sbjct 30576 TCCATACCGCAGAGATTTATCAAGTACTTCCAGTCTGCGTTCATTCGGTAGAGGTCCTGC 30517
Query 160710 ATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTA 160769
||||| || | || ||||| || |||||||| || || ||||| ||| |||| || | |
Sbjct 30516 ATGCAGTTGAGGTCAGCCTGGACCCGGCTCCAAGATGCATACACAACGCTCTCCAGCTGA 30457
Query 160770 CTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAA- 160825
|||||||||||||| ||| |||||| || | || || |||| | |||| |||| |
Sbjct 30456 CTGGCCACAAAGACATTACTGAAACAGGATGCAATGCCAATCACCGCGGCCAAAAAGGAT 30397
Query 160826 -CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGG 160884
| ||| || ||| |||||||| | |||||| | ||||||||| || ||||
Sbjct 30396 TCCTCTGAT-----TTTGTATCCACGTGAATGCAATAGAAATTCTGAGGCATATAAATGG 30342
Query 160885 CCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCG 160944
|||| || | ||| || | ||| || || || ||||| | ||| | ||| || ||||| |
Sbjct 30341 CCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTACAGAATATGCTATTG 30282
Query 160945 GAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAAT 161004
||||||| | ||| || ||| |||| | | || || ||| ||||||| |||
Sbjct 30281 GAAACTCTGCCTCTTCCTTACTAAGGGGTTCTACAATATATTTGCGCTTCTTGATGAAAG 30222
Query 161005 AATCACAATCCCGCGTCATGTTGATATA 161032
|| ||||||| | |||||||| || ||
Sbjct 30221 AAGCACAATCACTGGTCATGTTTATGTA 30194
>seq6540
Length=125837
Score = 178 bits (196), Expect = 1e-39
Identities = 228/312 (73%), Gaps = 2/312 (1%)
Strand=Plus/Minus
Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212
||||| | ||| | | ||| || ||||| || || || || || |||||||||||| ||
Sbjct 78044 AGAGTGAGGCAGGCTATTCATGAGATCTTCCCAGAACCAAAGGTATTGAAGAGGCACTTG 77985
Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272
| || ||||| || |||| |||||||||||| || || | |||||||| ||| |||
Sbjct 77984 TAACACCCTTCATCTTCCAAGGTGGTATTCCAGAAGGTAATGGTTGAGTTCATGAGTCCC 77925
Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332
| ||| || ||||| | || ||||| | ||| || |||||||| || ||||||| |
Sbjct 77924 AGCTGGGTGATGTTTATCTTGTCCTTATAGGCAGGCTGGACTACAACCCCATGGTTCTGG 77865
Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392
|| |||||| |||||| || ||||| ||||| || || ||||| || || |||| |
Sbjct 77864 CTAAAGGTGATCATGTTTTCTGGGCTTACAGCCTTGATTTTTTGCCATGTCACAATCAAA 77805
Query 168393 ACCTCTTTATCGGTC-TGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCG 168451
|| || | | || ||||| || ||||| | ||||| || |||||||||| ||||
Sbjct 77804 ACTTC-CTGGGGATCTTGCAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAGCAACTCTCT 77746
Query 168452 CTCATCTTGAGT 168463
||||||| ||
Sbjct 77745 TACATCTTGGGT 77734
>seq9961
Length=70868
Score = 107 bits (118), Expect = 2e-18
Identities = 170/244 (70%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 176182 TCCATTGAAAGTATGTGTTGTAGATTGTGTTGTTTGTATCTAGTATATGTAGATATTTTA 176241
|||| | |||||| | ||| | | | |||||| |||||| | | ||||| |||
Sbjct 69268 TCCAGTTAAAGTAACTAAGGTATAATTTATTGTTTTTATCTACTTCCTTCAGATACTTTG 69327
Query 176242 CTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGTGGAATGTAGT 176301
|||| |||| || |||| |||||| | ||||| || |||| | || |||||| || |
Sbjct 69328 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 69387
Query 176302 TTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCTAATAATGAGC 176361
| ||||| |||| || || || || ||||| | || || | | || | || |
Sbjct 69388 TCTCATAGTTTTCCCTAGATGGCCCCAAAACAACAGGCACAGAGCCAGCCAGAAAAGCAT 69447
Query 176362 GGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCTAAATAGAACT 176421
||||| |||||||| |||||| || |||| |||||||||||||| | | ||| || |
Sbjct 69448 TGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAAAGATAAAATT 69507
Query 176422 TACA 176425
| ||
Sbjct 69508 TGCA 69511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 575483523511320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |