Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq11145 363 2e-95 seq6540 178 1e-39 seq9961 107 2e-18 >seq11145 Length=73809 Score = 363 bits (402), Expect = 2e-95 Identities = 678/988 (69%), Gaps = 17/988 (2%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 |||||| || |||| ||| |||| ||| || | ||| | ||| |||||| || || || Sbjct 31171 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCGATGTCCGTGTCGAACTTGTTGGC 31112 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 ||||| ||||| | | || ||||||| || ||| || | ||||| ||||| || Sbjct 31111 GAACAAGTGGTGCACACGC---AGCATCCAGTTCAAGTCACCCGCTCCGAAAACGCACAC 31055 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 ||| || | ||| |||||| |||| |||||||| | || || || | | ||||||||| Sbjct 31054 GGAGCGCACGTGGACGCCGCTGCACGGCGGGTAGGGGGCGCCCTTGGAAATGTCACCTTC 30995 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 ||||||||||||| ||||||||||| || || ||||||||||| | ||||| || | Sbjct 30994 AAAGTACTGCCACTTGACAAACCTGGCAATTGCTTGCATGTCGGACATATCGTACTTATG 30935 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | | || || || |||| || | ||| | |||||||| || | || Sbjct 30934 GCTTAAGGACAGTGACCCTGGGACTTCGGGGATCCTCTGAATAGTGGCCCAGAGATACTC 30875 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAAC-CTGTCCCGCA 160410 ||| |||||||| ||||| || | ||| ||||| |||| | ||| | || || | Sbjct 30874 GTCCGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGTATTTTTTCATTCTCG-A 30816 Query 160411 GAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTA 160470 | || | || || || | || ||||| || || ||||| || || | ||| Sbjct 30815 GCACATACTCCACATACCTCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTG 30756 Query 160471 TGGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGC 160529 | | ||| || ||| ||| ||| || |||| | || | ||| ||||| | Sbjct 30755 TTTCAAGAGGAGGA-TGTATTTTGTCGGTCCCCATGTTTGTCAACTTTCCATTCACGACT 30697 Query 160530 GCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTG 160589 || | |||| |||||||| | | || | | |||||| | ||||| ||||| | Sbjct 30696 GCATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATTCTCTCCGTTTCTAGGTTA 30637 Query 160590 TTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAG 160649 || | || | ||| || |||| | |||| || || ||||| || || | ||||| Sbjct 30636 TTCTCGCCCATTAACGACTTGAGCTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAA 30577 Query 160650 TCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTC 160709 || ||||||| | ||||||| ||||||||| | ||| ||| || |||||| | Sbjct 30576 TCCATACCGCAGAGATTTATCAAGTACTTCCAGTCTGCGTTCATTCGGTAGAGGTCCTGC 30517 Query 160710 ATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTA 160769 ||||| || | || ||||| || |||||||| || || ||||| ||| |||| || | | Sbjct 30516 ATGCAGTTGAGGTCAGCCTGGACCCGGCTCCAAGATGCATACACAACGCTCTCCAGCTGA 30457 Query 160770 CTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAA- 160825 |||||||||||||| ||| |||||| || | || || |||| | |||| |||| | Sbjct 30456 CTGGCCACAAAGACATTACTGAAACAGGATGCAATGCCAATCACCGCGGCCAAAAAGGAT 30397 Query 160826 -CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGG 160884 | ||| || ||| |||||||| | |||||| | ||||||||| || |||| Sbjct 30396 TCCTCTGAT-----TTTGTATCCACGTGAATGCAATAGAAATTCTGAGGCATATAAATGG 30342 Query 160885 CCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCG 160944 |||| || | ||| || | ||| || || || ||||| | ||| | ||| || ||||| | Sbjct 30341 CCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTACAGAATATGCTATTG 30282 Query 160945 GAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAAT 161004 ||||||| | ||| || ||| |||| | | || || ||| ||||||| ||| Sbjct 30281 GAAACTCTGCCTCTTCCTTACTAAGGGGTTCTACAATATATTTGCGCTTCTTGATGAAAG 30222 Query 161005 AATCACAATCCCGCGTCATGTTGATATA 161032 || ||||||| | |||||||| || || Sbjct 30221 AAGCACAATCACTGGTCATGTTTATGTA 30194 >seq6540 Length=125837 Score = 178 bits (196), Expect = 1e-39 Identities = 228/312 (73%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212 ||||| | ||| | | ||| || ||||| || || || || || |||||||||||| || Sbjct 78044 AGAGTGAGGCAGGCTATTCATGAGATCTTCCCAGAACCAAAGGTATTGAAGAGGCACTTG 77985 Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272 | || ||||| || |||| |||||||||||| || || | |||||||| ||| ||| Sbjct 77984 TAACACCCTTCATCTTCCAAGGTGGTATTCCAGAAGGTAATGGTTGAGTTCATGAGTCCC 77925 Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332 | ||| || ||||| | || ||||| | ||| || |||||||| || ||||||| | Sbjct 77924 AGCTGGGTGATGTTTATCTTGTCCTTATAGGCAGGCTGGACTACAACCCCATGGTTCTGG 77865 Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392 || |||||| |||||| || ||||| ||||| || || ||||| || || |||| | Sbjct 77864 CTAAAGGTGATCATGTTTTCTGGGCTTACAGCCTTGATTTTTTGCCATGTCACAATCAAA 77805 Query 168393 ACCTCTTTATCGGTC-TGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCG 168451 || || | | || ||||| || ||||| | ||||| || |||||||||| |||| Sbjct 77804 ACTTC-CTGGGGATCTTGCAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAGCAACTCTCT 77746 Query 168452 CTCATCTTGAGT 168463 ||||||| || Sbjct 77745 TACATCTTGGGT 77734 >seq9961 Length=70868 Score = 107 bits (118), Expect = 2e-18 Identities = 170/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 176182 TCCATTGAAAGTATGTGTTGTAGATTGTGTTGTTTGTATCTAGTATATGTAGATATTTTA 176241 |||| | |||||| | ||| | | | |||||| |||||| | | ||||| ||| Sbjct 69268 TCCAGTTAAAGTAACTAAGGTATAATTTATTGTTTTTATCTACTTCCTTCAGATACTTTG 69327 Query 176242 CTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGTGGAATGTAGT 176301 |||| |||| || |||| |||||| | ||||| || |||| | || |||||| || | Sbjct 69328 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 69387 Query 176302 TTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCTAATAATGAGC 176361 | ||||| |||| || || || || ||||| | || || | | || | || | Sbjct 69388 TCTCATAGTTTTCCCTAGATGGCCCCAAAACAACAGGCACAGAGCCAGCCAGAAAAGCAT 69447 Query 176362 GGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCTAAATAGAACT 176421 ||||| |||||||| |||||| || |||| |||||||||||||| | | ||| || | Sbjct 69448 TGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAAAGATAAAATT 69507 Query 176422 TACA 176425 | || Sbjct 69508 TGCA 69511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575483523511320