Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq24761 107 4e-18 seq33 105 1e-17 seq2586 98.7 2e-15 seq7051 93.3 8e-14 seq4730 91.5 3e-13 seq23190 89.7 1e-12 >seq24761 Length=36067 Score = 107 bits (118), Expect = 4e-18 Identities = 163/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAG-CCTCTTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||| | || |||| || || || || ||| Sbjct 10529 ACCACCACAAAGTCTCAACACAATATGAAGAGTGGACCCCTTTTGA-ATGTTGTAGTCAA 10587 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | |||||| || ||||| | Sbjct 10588 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGG 10647 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 |||||||| || || || || ||| |||||||| ||| | ||| || | ||| | Sbjct 10648 AAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCTATTGTATCCGAGGGTTCAA 10707 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCA 192535 | || ||||| ||||| || || || | || || | || ||||||| Sbjct 10708 CCTCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 10754 >seq33 Length=520270 Score = 105 bits (116), Expect = 1e-17 Identities = 140/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || ||||| || || | |||| |||| ||| || |||||||||| Sbjct 39738 CTTTTGA-ATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAGA 39680 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | ||| || || ||||| || ||||||||||||||||| || || |||||||| Sbjct 39679 TCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACATTTT 39620 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 ||| | |||||| | ||| || | ||||| | ||| || || || | || || | | Sbjct 39619 CTATTGTATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCTTCCTGA 39560 Query 192527 ATATCTGCATTTT 192539 | |||||||| || Sbjct 39559 AAATCTGCATCTT 39547 >seq2586 Length=172570 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| || || | ||| | ||| | ||| || || || || ||||| Sbjct 46672 ACCACCACGAAGACTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGA 46731 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || ||| |||| |||| ||| || ||||||||||| | ||| || || ||||| || Sbjct 46732 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 46791 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| || || || || || ||||| || || | ||| || | ||| || Sbjct 46792 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGAC 46851 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCA 192535 || ||||| ||||| || || || || || | || ||||||| Sbjct 46852 CTCGAGAGTGATGGTCTTCCCCGTCTGGGTCTTCACGAAAATCTGCA 46898 >seq7051 Length=109996 Score = 93.3 bits (102), Expect = 8e-14 Identities = 121/166 (73%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || ||| |||| |||| ||| || ||||||||||| | ||| || || ||||| || Sbjct 16251 AAAGTACGTCCATCTTCCACTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 16192 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 |||||||| ||||| || || || |||||||| | | | |||||| | ||| || Sbjct 16191 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAGCT 16132 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCA 192535 || ||||| ||||| | || | || || || || || ||||||| Sbjct 16131 TCAAGAGTGATGGTCATCCCTG-GAAGGTCTTCATGAAAATCTGCA 16087 >seq4730 Length=198489 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| | ||| || || ||||| || |||||||| | Sbjct 50975 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCT 50916 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || |||||||| ||| | ||| || | ||| || || ||||| | Sbjct 50915 TGTCCTGGATCTTGACCTTTACATTCTCTATCGTATCCGAGGGTTCGACCTCGAGAGTGA 50856 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || || || | || || | ||| |||||||| || Sbjct 50855 CGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATGTT 50816 >seq23190 Length=44765 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368 ||||| | ||| | || || | ||| | ||| | ||| ||| || || || || || || Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGA-ATGTTGTAGTCCGA 17084 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || ||| ||| ||| ||| || ||||||||||| | ||| || || ||||| || Sbjct 17083 CAGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGG 17024 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| || || || || || |||||||| ||| | ||| || | || || Sbjct 17023 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGAC 16964 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | ||||| ||||| || || || | || || | ||||||||||| || Sbjct 16963 CTTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 16913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981445698196950