Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq33 105 1e-17 seq23190 100 5e-16 seq5513 84.2 4e-11 >seq33 Length=520270 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || || || |||| | | || |||| ||| || |||||||| || | ||| Sbjct 39732 AATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCT 39673 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 || |||||||| || ||||||||||||||||| || || |||||||| ||| || Sbjct 39672 TTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACATTTTCTATTGT 39613 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| | ||| || | ||||| | ||| || || || | || || |||| ||||| Sbjct 39612 ATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCTTCCTGAAAATCTG 39553 Query 172067 CATTTT 172072 ||| || Sbjct 39552 CATCTT 39547 >seq23190 Length=44765 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | ||||| || || | ||| | ||| | ||| || ||| || || || || Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGAC 17083 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || ||| | | ||| ||| || |||||||| || | ||| || |||||||| || Sbjct 17082 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 17023 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || || || || || |||||||| ||| ||||| || | || || Sbjct 17022 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 16963 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||||| ||||| || || || | || || | |||||||||||| || Sbjct 16962 TTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 16913 >seq5513 Length=154062 Score = 84.2 bits (92), Expect = 4e-11 Identities = 176/246 (72%), Gaps = 26/246 (11%) Strand=Plus/Plus Query 126951 TTTAACtatttataaataatgaatattgataaatgtattaatg--aatatgataaaccta 127008 ||||| ||| |||| ||| | ||||| |||||| ||| ||| ||||| ||||| || Sbjct 89464 TTTAA-TATATATATATA-TAAATAT--ATAAATATATAAATATAAATAT-ATAAAA-TA 89517 Query 127009 tatattatacttactatgatttatatagaa--atatgaatgatata---atttacaatta 127063 ||||||||| || ||| | ||||| | |||| || ||||| ||||| | || Sbjct 89518 TATATTATATATATTATATATAATATATATTTATATATATTATATATATATTTATATCTA 89577 Query 127064 tgataataATATTGTTAAAACATATATGGATATTTTAT-TATCTCAAATACAATTTTTAT 127122 | |||||| ||| | | | |||||| ||||||||| ||| | | ||| ||| | || Sbjct 89578 T-ATAATATAATTAT--ATAGATATAT--ATATTTTATATATTTTATATAAAATATATAA 89632 Query 127123 CAACTATAAATATTaaaaaaaTATGTAATACATATTCGA-ATAGAATGGTACATATATTA 127181 |||||||| | |||||||| | ||| ||||| | ||| ||| || |||||||| Sbjct 89633 -----ATAAATAT-ATAAAAATATATTATATATATTATATATATAATTATATATATATTA 89686 Query 127182 TATATA 127187 |||||| Sbjct 89687 TATATA 89692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902414289990600