Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq33 105 1e-17
seq23190 100 5e-16
seq5513 84.2 4e-11
>seq33
Length=520270
Score = 105 bits (116), Expect = 1e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || || || || |||| | | || |||| ||| || |||||||| || | |||
Sbjct 39732 AATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCT 39673
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
|| |||||||| || ||||||||||||||||| || || |||||||| ||| ||
Sbjct 39672 TTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACATTTTCTATTGT 39613
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
|||||| | ||| || | ||||| | ||| || || || | || || |||| |||||
Sbjct 39612 ATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCTTCCTGAAAATCTG 39553
Query 172067 CATTTT 172072
||| ||
Sbjct 39552 CATCTT 39547
>seq23190
Length=44765
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | ||||| || || | ||| | ||| | ||| || ||| || || || ||
Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGAC 17083
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || ||| | | ||| ||| || |||||||| || | ||| || |||||||| ||
Sbjct 17082 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 17023
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|||||||| || || || || || |||||||| ||| ||||| || | || ||
Sbjct 17022 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 16963
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||||| ||||| || || || | || || | |||||||||||| ||
Sbjct 16962 TTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 16913
>seq5513
Length=154062
Score = 84.2 bits (92), Expect = 4e-11
Identities = 176/246 (72%), Gaps = 26/246 (11%)
Strand=Plus/Plus
Query 126951 TTTAACtatttataaataatgaatattgataaatgtattaatg--aatatgataaaccta 127008
||||| ||| |||| ||| | ||||| |||||| ||| ||| ||||| ||||| ||
Sbjct 89464 TTTAA-TATATATATATA-TAAATAT--ATAAATATATAAATATAAATAT-ATAAAA-TA 89517
Query 127009 tatattatacttactatgatttatatagaa--atatgaatgatata---atttacaatta 127063
||||||||| || ||| | ||||| | |||| || ||||| ||||| | ||
Sbjct 89518 TATATTATATATATTATATATAATATATATTTATATATATTATATATATATTTATATCTA 89577
Query 127064 tgataataATATTGTTAAAACATATATGGATATTTTAT-TATCTCAAATACAATTTTTAT 127122
| |||||| ||| | | | |||||| ||||||||| ||| | | ||| ||| | ||
Sbjct 89578 T-ATAATATAATTAT--ATAGATATAT--ATATTTTATATATTTTATATAAAATATATAA 89632
Query 127123 CAACTATAAATATTaaaaaaaTATGTAATACATATTCGA-ATAGAATGGTACATATATTA 127181
|||||||| | |||||||| | ||| ||||| | ||| ||| || ||||||||
Sbjct 89633 -----ATAAATAT-ATAAAAATATATTATATATATTATATATATAATTATATATATATTA 89686
Query 127182 TATATA 127187
||||||
Sbjct 89687 TATATA 89692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902414289990600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |