Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11688 134 2e-25 seq2441 131 2e-24 seq1737 116 5e-20 seq23176 111 2e-18 seq1415 111 2e-18 seq16758 104 3e-16 seq11890 87.8 2e-11 seq7115 87.8 2e-11 seq1446 86.0 8e-11 >seq11688 Length=102791 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 8335 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 8394 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 8395 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 8454 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 8455 TGTCGTTGACGAAGGAGTTCATGATGCCCATAGCCTTGGACGAGATGCCAGTGTCCGGGT 8514 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 8515 GGACCTGCTTCAGCACCTTGTA 8536 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||||||| ||||||||||| | | || Sbjct 6993 GCTTGGCCAGCTCCCCGGGCAGCAGCAAGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 7052 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 7053 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 7112 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||||||||||| ||| | ||| ||||| || ||| |||| Sbjct 7113 TGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTTAGACGAGATACCGGTGTCCGGGT 7172 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 7173 GGACCTGCTTCAGCACCTTGTA 7194 >seq2441 Length=293897 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | || Sbjct 186395 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 186454 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || | ||| ||||||| |||| | Sbjct 186455 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGCGACGACTCACCCGCGATGCGCTCGAAAA 186514 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 186515 TGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 186574 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 186575 GGACCTGCTTCAGCACTTTGTA 186596 Score = 131 bits (144), Expect = 2e-24 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| | | | || Sbjct 231856 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 231915 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||| || |||||| ||||||| |||| | Sbjct 231916 TGGTCGAGCGCTTGTTGTAATGCGCCAAGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 231975 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||| | || ||||| || ||| |||| Sbjct 231976 TGTCGTTAACGAACGAATTCATGATGCCCATGGCTTTAGACGAGATACCGGTGTCCGGGT 232035 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||||| | || |||||| Sbjct 232036 GGACCTGCTTCAGCACCTTGTAGACGTACACCGAGTA 232072 >seq1737 Length=204213 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| | | || Sbjct 34805 GCTTGGCCAACTCCCCGGGCAACAACAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 34864 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | ||||||||||| |||||| ||||||| |||| | Sbjct 34865 TGGTCGAGCGTTTGTTGTAATGCGCCAGACGCGACGCCTCGCCCGCGATGCGCTCGAAGA 34924 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| || ||||||| ||| | |||| ||| || || || |||| Sbjct 34925 TGTCGTTGACAAATGAATTCATGATACCCATGGCCTTGGAGGAAATACCGGTATCCGGGT 34984 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 34985 GAACCTGCTTCAACACCTTGTA 35006 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 93564 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGACGTGA 93623 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 93624 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 93683 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 93684 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCCGGGT 93743 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 93744 GGACCTGCTTCAGGACCTTGTA 93765 Score = 102 bits (112), Expect = 1e-15 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| || |||||||| | | || Sbjct 154017 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTTTGGATCTCCCTGGACGTGA 153958 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||| |||| | Sbjct 153957 TGGTCGAGCGCTTGTTATAATGCGCCAGGCGCGACGCCTCGCCCGCAATGCGCTCGAAGA 153898 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 153897 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 153838 Query 1254523 G 1254523 | Sbjct 153837 G 153837 Score = 98.7 bits (108), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||| || ||||| ||||||||||| | | | || Sbjct 47805 GCTTGGCCAGCTCCCCAGGCAGCAGCAGACGTACGGCCGTCTGGATCTCCCTGGAGGTGA 47864 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | |||||||| || |||||| ||||||| || | | Sbjct 47865 TGGTCGAGCGTTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCAAAGA 47924 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || ||||| ||||||||||||| ||| | ||| ||||| || ||| |||| Sbjct 47925 TATCATTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATACCGGTGTCCGGGT 47984 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| |||||||| || Sbjct 47985 GGACCTGCTTCAGCACCTTATA 48006 >seq23176 Length=42880 Score = 111 bits (122), Expect = 2e-18 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||| || || ||| ||| | |||||||||||| ||||| | ||| || | ||| | Sbjct 12152 TGGCTAGCTCACCGGGCAACAGCAGGCGCACGGCCGTCTGCACCTCCCGGGACGTGATGG 12211 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| | ||||||| ||| ||||||| | | || || |||| |||| Sbjct 12212 TAGACCGCTTGTTGTAATGCGCCAAACGAGAGGCCTCGCTAGCAATACGCTCGAAGATGT 12271 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| ||||||||||| | ||| | |||| || || || ||| ||||||| Sbjct 12272 CGTTGACGAACGAGTTCATAATACCCATAGCCTTGGAAGAAATACCGGTGTCCGGGTGCA 12331 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| | ||||||||| Sbjct 12332 CCTGCTTTAACACCTTGTA 12350 >seq1415 Length=240991 Score = 111 bits (122), Expect = 2e-18 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | | || Sbjct 138983 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGAGGTGA 139042 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || || ||| ||||||| |||| | Sbjct 139043 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 139102 Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486 |||||||||| ||||||||||||| Sbjct 139103 TGTCGTTGACGAACGAGTTCATGA 139126 Score = 95.1 bits (104), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| | |||||| ||| | ||||||||| || ||||||||||| || | || Sbjct 164252 GCTTGGCTAACTCGCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGACGTGA 164193 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || || ||| ||||||| |||| | Sbjct 164192 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 164133 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| | ||| | ||| || ||||| ||| || | Sbjct 164132 TGTCGTTCACGAAGGAGTTCATAATGCCCATGGCCTTCGAAGAAATGCCGGTGTCTGGAT 164073 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| || || Sbjct 164072 GAACCTGCTTCAGCACTTTATA 164051 >seq16758 Length=60746 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||| || ||||||||||| | | || Sbjct 51433 GCTTGGCCAGCTCCCCAGGGAGCAGTAGGCGCACAGCCGTCTGGATCTCCCTAGATGTGA 51492 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| ||||||||| | ||||||| || ||||| ||||||| || | | Sbjct 51493 TCGTGGAGCGCTTGTTGTAATGCGCCAAGCGCGACGCCTCACCCGCGATGCGCTCAAAGA 51552 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 51553 TGTCGTTGACGAACGAGTTCATGATACCCATGGCCTTGGATGAGATGCCGGTGTCTGGGT 51612 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | || ||||| Sbjct 51613 GGACCTGCTTCAAAACTTTGTA 51634 >seq11890 Length=66964 Score = 87.8 bits (96), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 507105 AGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 507164 ||||||| ||||||||||| || | | ||||| || ||||||||||| || ||| Sbjct 20976 AGCGGTTGAAGGGCAAGGAAGGCCGTGTGCGCGGGAACCTGATGGGCAAGCGGGTGGACT 20917 Query 507165 TTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGC 507224 | | || ||| | ||||||| |||||||||| | || ||||||| |||| ||||||| Sbjct 20916 TCTCGGCCCGCACTGTCATCACCCCCGACCCCAACCTCTCCATTGACCAGGTTGGCGTGC 20857 Query 507225 C 507225 | Sbjct 20856 C 20856 >seq7115 Length=107973 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || |||||| | || || || || |||||| | |||||||| | |||| ||| || Sbjct 99743 ACACTTTTTGAGCTTATACTGGCAGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 99802 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| ||||| ||||||||||| || | || |||||||| | ||||| Sbjct 99803 ACCTGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTAGAAAGACA 99862 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 99863 TTCAATATCAA 99873 >seq1446 Length=222132 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| |||||| ||| || |||||| |||| ||||| Sbjct 145049 GCAGCAAACTACTTAGACATCAAAGGTCTGCTTGATGTTACCTGCAAGACTGTTGCCAAT 144990 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| || ||||| || || ||||| Sbjct 144989 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACATTCAATATCAA 144940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6087397966051569