Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq33 113 4e-20 seq15 113 4e-20 seq23190 107 2e-18 seq24761 96.9 3e-15 seq100962 91.5 1e-13 seq7051 84.2 2e-11 >seq33 Length=520270 Score = 113 bits (124), Expect = 4e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || || || || || || | || ||| | || ||| | | Sbjct 39549 GATGCAGATTTTCAGGAAGACCCTGACAGGGAAGACCGTCACTCTCAAGGTTGAACCTTC 39608 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| ||||||||||| ||||||||||| ||||| || || Sbjct 39609 AGATACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCTGACCA 39668 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881 ||| | |||||||||| || || || |||||||| | | | || |||| || || | Sbjct 39669 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGA-TGGCCATACTTTGTCTGACTACA 39727 Query 24882 ACATTCAAAAGGAATC 24897 ||||||||||||| || Sbjct 39728 ACATTCAAAAGGAGTC 39743 >seq15 Length=680746 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || ||| Sbjct 219887 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219946 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 219947 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 220006 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| |||||||||||||| ||| | | | | |||| || || ||| Sbjct 220007 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 220066 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGA 24928 || || || ||||| || || ||| |||| |||| ||| | ||| Sbjct 220067 ATCCAGAAAGAATCCACTCTGCACCTGGTCCTGCGCTTGAGGGGA 220111 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || | || ||||| || || || || || || || || Sbjct 218972 ACAATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCC 219031 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || ||||||||||| ||||| || || || || || Sbjct 219032 AGTGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCACCAGAC 219091 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||||||||||||||||||||||| ||| | | | | |||| || || Sbjct 219092 CAGCAGAGACTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 219151 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || || || || || || ||| |||| Sbjct 219152 AACATCCAGAAAGAGTCCACTCTGCACCTGGT 219183 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || |||||||| || || || || || Sbjct 219491 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219550 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || ||||||||||| ||| | | | || ||||| ||| Sbjct 219551 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219610 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || || || ||||| || ||| Sbjct 219611 ATCCAGAAAGAGTCGACCCTGCAC 219634 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || |||||||| || || || || || Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219778 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || ||||||||||| ||| | | | || ||||| ||| Sbjct 219779 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219838 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || || || ||||| || ||| Sbjct 219839 ATCCAGAAAGAGTCGACCCTGCAC 219862 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 219202 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 219261 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || ||||| || || || || || Sbjct 219262 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCA 219321 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || ||||||||||| ||| | | | || ||||| || Sbjct 219322 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219381 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || || || ||||| || ||| Sbjct 219382 CATCCAGAAAGAGTCGACCCTGCAC 219406 >seq23190 Length=44765 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || || ||| | || || || | Sbjct 16916 ATGCAGATATTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCAAGGTCAAACCCTCG 16975 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| ||||| |||||||| ||||| |||||||| ||||| || || Sbjct 16976 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAC 17035 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||| || || || | ||| || | | |||| || || ||| Sbjct 17036 CAAAGACTGATCTTTGCTGGCAAGCAACGGGAAAATGGACGTACTCTGTCGGACTACAAC 17095 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||||||||||| | || || || | |||||| || | || || |||| Sbjct 17096 ATTCAAAAGGAGCCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGCG 17144 >seq24761 Length=36067 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||| || | || || || || || || || || || ||||| || ||| || | | Sbjct 10754 TGCAGATTTTCGTGAAGACCCTGACAGG-AAGACCATCACTCTCGAGGTTGAACCCTCGG 10696 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| |||||| ||||| |||||||| ||||| |||||||| | || || || | Sbjct 10695 ATACAATAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 10636 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | | |||||||||| || || || ||||| ||| | | ||| || || |||| Sbjct 10635 AGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACA 10576 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||| || || || || | |||||| || Sbjct 10575 TTCAAAAGGGGTCCACTCTTCATATTGTGTTGAGA 10541 >seq100962 Length=431 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||||| || | | || || || || | || ||||| || ||| || | Sbjct 259 GATGCAGATTTTTATGAAGATCCGGACAGGGAAGACCACCACTCTCGAGGTCGAACCCTC 200 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| ||||||||||| || |||| ||| ||| | || || Sbjct 199 AGATACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTGACCA 140 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 | | | | | |||||| || || || ||||| ||| | | |||| || || || Sbjct 139 GCGAAGACTAACCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 80 Query 24883 CATTCAAAAGGAATCGAC 24900 |||||||||||| || || Sbjct 79 CATTCAAAAGGAGTCTAC 62 >seq7051 Length=109996 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||| || || || || || | || | || || || || |||| ||| || | | Sbjct 16087 TGCAGATTTTCATGAAGAC-CTTCCAGGGATGACCATCACTCTTGAAGCTGAACCCTCAG 16145 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| ||||| ||||| |||||||| || || |||||||| ||||| || || | Sbjct 16146 ATACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAGC 16205 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 || | |||||||||| || || || |||| ||| || || | || || |||| Sbjct 16206 AAAGACTGATCTTTGCTGGCAAGCAAGTGGAAGATG-GACGTACTTT---GACTACAACA 16261 Query 24885 TTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGA 24919 |||||||||| || || || || ||| ||||| || Sbjct 16262 TTCAAAAGGAGTCCACTCTTCATCTTAATGTTGAGA 16297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448544774787960