Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq15 122 7e-23 seq23190 102 6e-17 seq24761 95.1 9e-15 seq24981 91.5 1e-13 seq33 89.7 4e-13 seq7051 87.8 1e-12 >seq15 Length=680746 Score = 122 bits (134), Expect = 7e-23 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 29562 TCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAAT 29621 ||||||||| ||||| |||| || || ||||||||||| || ||||| || || | | Sbjct 220111 TCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAG 220052 Query 29622 GGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAAT 29681 |||||| ||| || || ||||| |||||| | ||||| || ||||| || || || || Sbjct 220051 GGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGAT 219992 Query 29682 ACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTC 29741 ||||| ||||| || | || ||||| | || | |||||| | || || || Sbjct 219991 GCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTC 219932 Query 29742 AAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || |||||||| | ||| || || || |||||||| Sbjct 219931 CAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 219887 >seq23190 Length=44765 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| |||| || ||||||||||| || |||| | || || || Sbjct 17128 CAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGACAGAGTACGTCCATT 17069 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || |||| ||||||||| | |||| |||||| || || || ||||| || || ||||| Sbjct 17068 TTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCCTTGTC 17009 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || ||| || | ||||| || || Sbjct 17008 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTTGAGAGTGATGGT 16949 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | ||| || || ||||||||||| || Sbjct 16948 CTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 16913 >seq24761 Length=36067 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| | ||||||||||| || || | || || ||| Sbjct 10544 CAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTAGTCAAACAAAGTACGTCCATC 10603 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||| ||||| || || | ||| || || ||||| Sbjct 10604 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCCTTGTC 10663 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || |||| || || ||||| || || Sbjct 10664 CTGGATCTTAGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 10723 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCA 29785 || || || | ||| || || || ||||||| Sbjct 10724 CTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 10754 >seq24981 Length=33127 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || ||||||||||| || || ||||| || | | || || ||| Sbjct 6658 AGCACCAAGTGTAGGGTGGATTCTTTCTGGATATTATAGTCTGAGAGAGTACGGCCATCC 6717 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || |||||| | ||| | |||| || || || | ||| | || |||| ||||| Sbjct 6718 TC-AGCTGTTTGTCTGCAAAAATCAGACTCTGTTGGTGAGGCAGGATGTCCTCAGTGTCT 6776 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 | | ||||| | ||||||| | || ||| || |||| || |||||||| || || Sbjct 6777 T-TGATTTTGGCTTTGACATTCTCAGTGGTGACACTGAGTTTGACCTCAAGAGTGATGGT 6835 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784 ||||| || | ||| || ||||| |||||| Sbjct 6836 CTTGCCCGTCAGGGTCTTCACAAAGATCTGC 6866 >seq33 Length=520270 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 29591 TGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAG 29650 |||| || ||||||||||| || || | | || | ||| || ||||| ||||||| Sbjct 39745 TGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAG 39686 Query 29651 CATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGA 29710 || | |||| ||||||||| || || || || || ||||| ||||| | || || | Sbjct 39685 CAAAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTA 39626 Query 29711 CAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTT 29770 || |||||| || || ||| |||| || | ||||| | || || || || | ||| | Sbjct 39625 CATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCT 39566 Query 29771 TAACAAATATCTGCATTTT 29789 | || |||||||| || Sbjct 39565 TCCTGAAAATCTGCATCTT 39547 >seq7051 Length=109996 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/203 (70%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| ||||| || ||||||||||| || || | || || ||| || | ||| Sbjct 16284 ATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCACTTG 16229 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | |||| ||||||||| || || ||||| || || || || || | || Sbjct 16228 CTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTT 16169 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||||| || || || |||| |||||||||| || || | || | Sbjct 16168 GGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAGCTTCAAGAGTGATGGTCATCCCTG- 16110 Query 29763 TAAGGTTTTAACAAATATCTGCA 29785 ||||| || | || ||||||| Sbjct 16109 GAAGGTCTTCATGAAAATCTGCA 16087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384089818803537