Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq15 122 7e-23
seq23190 102 6e-17
seq24761 95.1 9e-15
seq24981 91.5 1e-13
seq33 89.7 4e-13
seq7051 87.8 1e-12
>seq15
Length=680746
Score = 122 bits (134), Expect = 7e-23
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 29562 TCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAAT 29621
||||||||| ||||| |||| || || ||||||||||| || ||||| || || | |
Sbjct 220111 TCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAG 220052
Query 29622 GGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAAT 29681
|||||| ||| || || ||||| |||||| | ||||| || ||||| || || || ||
Sbjct 220051 GGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGAT 219992
Query 29682 ACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTC 29741
||||| ||||| || | || ||||| | || | |||||| | || || ||
Sbjct 219991 GCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTC 219932
Query 29742 AAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || |||||||| | ||| || || || ||||||||
Sbjct 219931 CAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 219887
>seq23190
Length=44765
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| |||| || ||||||||||| || |||| | || || ||
Sbjct 17128 CAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGACAGAGTACGTCCATT 17069
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| |||| ||||||||| | |||| |||||| || || || ||||| || || |||||
Sbjct 17068 TTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCCTTGTC 17009
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || || || ||| || | ||||| || ||
Sbjct 17008 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTTGAGAGTGATGGT 16949
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || | ||| || || ||||||||||| ||
Sbjct 16948 CTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 16913
>seq24761
Length=36067
Score = 95.1 bits (104), Expect = 9e-15
Identities = 149/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| | ||||||||||| || || | || || |||
Sbjct 10544 CAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTAGTCAAACAAAGTACGTCCATC 10603
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| ||| ||||| || || | ||| || || |||||
Sbjct 10604 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCCTTGTC 10663
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || || || |||| || || ||||| || ||
Sbjct 10664 CTGGATCTTAGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 10723
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCA 29785
|| || || | ||| || || || |||||||
Sbjct 10724 CTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 10754
>seq24981
Length=33127
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/211 (71%), Gaps = 3/211 (1%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || || ||||||||||| || || ||||| || | | || || |||
Sbjct 6658 AGCACCAAGTGTAGGGTGGATTCTTTCTGGATATTATAGTCTGAGAGAGTACGGCCATCC 6717
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || |||||| | ||| | |||| || || || | ||| | || |||| |||||
Sbjct 6718 TC-AGCTGTTTGTCTGCAAAAATCAGACTCTGTTGGTGAGGCAGGATGTCCTCAGTGTCT 6776
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
| | ||||| | ||||||| | || ||| || |||| || |||||||| || ||
Sbjct 6777 T-TGATTTTGGCTTTGACATTCTCAGTGGTGACACTGAGTTTGACCTCAAGAGTGATGGT 6835
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784
||||| || | ||| || ||||| ||||||
Sbjct 6836 CTTGCCCGTCAGGGTCTTCACAAAGATCTGC 6866
>seq33
Length=520270
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 29591 TGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAG 29650
|||| || ||||||||||| || || | | || | ||| || ||||| |||||||
Sbjct 39745 TGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAG 39686
Query 29651 CATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGA 29710
|| | |||| ||||||||| || || || || || ||||| ||||| | || || |
Sbjct 39685 CAAAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTA 39626
Query 29711 CAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTT 29770
|| |||||| || || ||| |||| || | ||||| | || || || || | ||| |
Sbjct 39625 CATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGACGGTCTTCCCTGTCAGGGTCT 39566
Query 29771 TAACAAATATCTGCATTTT 29789
| || |||||||| ||
Sbjct 39565 TCCTGAAAATCTGCATCTT 39547
>seq7051
Length=109996
Score = 87.8 bits (96), Expect = 1e-12
Identities = 142/203 (70%), Gaps = 5/203 (2%)
Strand=Plus/Minus
Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642
|||||| ||||| || ||||||||||| || || | || || ||| || | |||
Sbjct 16284 ATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCACTTG 16229
Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702
||||||||| | |||| ||||||||| || || ||||| || || || || || | ||
Sbjct 16228 CTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTT 16169
Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
|| ||| ||||| || || || |||| |||||||||| || || | || |
Sbjct 16168 GGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAGCTTCAAGAGTGATGGTCATCCCTG- 16110
Query 29763 TAAGGTTTTAACAAATATCTGCA 29785
||||| || | || |||||||
Sbjct 16109 GAAGGTCTTCATGAAAATCTGCA 16087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384089818803537
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |