Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8844 187 2e-41 seq8315 185 6e-41 seq26394 179 3e-39 seq16687 113 3e-19 seq3457 104 2e-16 seq6954 95.1 9e-14 seq17850 89.7 4e-12 >seq8844 Length=64501 Score = 187 bits (206), Expect = 2e-41 Identities = 457/691 (66%), Gaps = 10/691 (1%) Strand=Plus/Minus Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 || || ||||| ||||| || || || | |||| ||| | |||| | | || | || Sbjct 29168 CGGTTGTCAAAGTCTTCTCCACCTAAGTGGGTATCTCCAGCTGTAGATTTGACCTCAAAG 29109 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | |||||| |||| || | | | |||||| || ||||||| |||||||| || Sbjct 29108 ATTCCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCACATATATCAAAGATC 29049 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 || ||||| ||||| | ||||| || | | ||| |||| ||||||||||||| Sbjct 29048 AGCACATTTCTTTCTGCTCCAACCTTTTTGTCTAAGCTATAGGCAATAGCAGCAGCAGTT 28989 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||| | |||||||| | ||| | || |||||||| |||| |||||||| || || Sbjct 28988 GGCTCACTGATAATTCTAAGTACACTGAGCCCAGCAATAGTTCCAGCATCTTTGGTAGCC 28929 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT 282487 || | || ||||| ||||| || || | || |||| ||| ||||| || || || Sbjct 28928 TGACACTGAGAATCATTAAAGTAAGCCAGTACTGTAACAACAGCATCGGTAACAGTCTTC 28869 Query 282488 CCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 282547 |||| || || |||| ||| ||||| || | |||| ||| ||||| | ||| Sbjct 28868 CCAAGGTAGGCTTCTGCTATTTCCTTCATCTTTGTCAAAACCATGGATGACA---CCTCT 28812 Query 282548 GGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 282607 ||| || | || | || | ||| ||||| || | || | || || Sbjct 28811 GGATAAAAACTTTTTGTCTCTCCCTTGTATTCTACTTGAACTTCAGGCCTGCCTGCATCA 28752 Query 282608 TT---AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAA 282664 || | || | || ||||||| |||||||| || || ||| |||||||| Sbjct 28751 TTCACCACCACGATGAAGGGCCAATGCTTCATATCAGACTGGACAACAGCATCATTAAAT 28692 Query 282665 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 | | ||||| || ||||| ||||| ||| || || ||||| | |||| |||| Sbjct 28691 TTTTGTCCAATGAAGCGTTTGTTATCAA----AGTGTTAGTGGGATTCATTGCAACTTGG 28636 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | || || ||||| || |||| |||| || || |||| | ||||| ||| || Sbjct 28635 TTCTTTGCAGCATCACCGATCAATCGTTCGGTATCATTAAAGGCGACATAGCTTGGTGTA 28576 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 282844 || | || || |||||||| ||||| |||| || || | | || | ||||| ||| Sbjct 28575 GTTCTGTTCCCCTGATCATTGGCAATTATTTACACATTTCTGTGCTGGAAGACACCCACA 28516 Query 282845 CAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 ||| | | || || || | |||||| |||| Sbjct 28515 CAAGAATAGGTGGTGCCAAGATCAATGCCAA 28485 >seq8315 Length=111752 Score = 185 bits (204), Expect = 6e-41 Identities = 783/1226 (64%), Gaps = 33/1226 (3%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| ||||| | ||||| ||||||||||||||||| | || | Sbjct 89483 GTCATGACTCCACCAGCAGTTTCAATTCCAAGGGAAAGAGGAGTGACATCCAACAGCAGC 89424 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | | ||||| |||||| | | ||| ||||| ||||| || | ||| |||||| Sbjct 89423 AAGTCTTGAACATTTTCAGATTTGTCTCCAGATAGAATGGCTGCCTGGACAGCTGCACCA 89364 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || |||||||| |||||||| || | | ||||| |||| ||| ||||||| || | Sbjct 89363 TAAGCAACAGCCTCATCAGGGTTGATGCTCTCATTCAGTTCTTTCGCATTGAAGAAGTCC 89304 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 ||||||| | ||| || || | | ||| || || || | ||||| ||||| Sbjct 89303 TGTAGAAGTTTCAGAATCTTGGGGATGTGGGTTGAACCACCCACCAGGACAATATCATGG 89244 Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | ||| || || || || || | |||| | |||| || || | || || | Sbjct 89243 ATCTGAGACTTGTCTAGCTTGGCATCCTGAAGGGCTTTCTCGACAAGGTCCAGCGTGTCA 89184 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 282022 | |||| || | | |||||||| ||| || |||| | | || | ||| Sbjct 89183 CGGAACAGTTCAGCATTCAGTTCTTCAAATCGGGCATGGGTAATTGAGGTATAGAAGTCA 89124 Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT--AGTGCAC 282080 |||||||| | | |||||| ||| | | || || ||||| ||||||| Sbjct 89123 ATTCCTTCATAGAGGTAATCAATCTCAGTACTGACCTGGGTGCTGGAAGAGGGAGTGCAC 89064 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGATTGAT-T 282135 | |||| | ||||| || || || | || | || || | || | |||| | Sbjct 89063 CT--AGCATGCTCACAAGCAGTATGAAGGCGACGGACAGCCCTCTTGTTCTCACTGATGT 89006 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTA 282193 | ||| || || | |||||| ||| ||| | ||| | || | || Sbjct 89005 C----CTGCTTGTGCTTGTG-CTTGAACTCTGCAATGAA--ATGGTTGACCATTTCGTTG 88953 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| ||||| || || || | |||| | |||| | || | || | |||| Sbjct 88952 TCAAAGTCTTCCCCACCTAAGTGGGTATCT------GTAGATTGGACCTCAAAGATTCCA 88899 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | |||| || | || | |||||| || |||||| | | |||| || || || Sbjct 88898 CCCTCAATAGTGAGAATTGACACATCAAAAGTGTCACCACATAAACCAAAGATCAGCACG 88839 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || ||||| | ||||| || | ||||| ||| ||||||||||||||| ||| Sbjct 88838 TTTCTTTCTGCTCCGACCTTTTTGTCTAAGCCATAGGCAGTAGCAGCAGCAGTTGGCTCA 88779 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || ||||| | ||||| || |||||||| |||| ||| |||| || || || | | Sbjct 88778 TTGATGATTCTAAGTACATTGAGCCCAGCAATAGTTCCAGCACCTTTGGTAGCCTGACGT 88719 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || ||||| ||||| || || || || || | ||| |||| || || || |||| | Sbjct 88718 TGAGAATCATTAAAGTAAGCGGGTACTGTGACAACAGCATTGGTAACGGTCTTCCCAAGA 88659 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA- 282552 || || |||| ||| ||||| || | |||| ||| ||||| | | |||||| | Sbjct 88658 TAGGCTTCTGCTATTTCCTTCATCTTTGTCAAAACCATGGATGACACCTCCTCTGGATAG 88599 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 | | | ||| | ||| ||| |||| || | || | | || |||| | Sbjct 88598 AAACTTTTTGTCTCTCCCTTG-TATTCTACTCGAACCTTAGGCCTGCTTGCATCATTCAC 88540 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTG---AACACTTTGGTCATTAAAATCTCT 282669 || || ||||||| |||||||| || || |||| | ||| | ||| Sbjct 88539 CACCACGAAGGGCCAATGCTTCATATCAGACTGGACAACAGCATCGTC----AGGTCTTC 88484 Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTT 282729 | | | | |||| ||||||||| || ||||| |||| | | || |||| | || Sbjct 88483 GTCCAGTGAGGGTTTGACATCAAAAACCGTGTTGGTGAGATTCATTACAACTTGGTTCTT 88424 Query 282730 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 282789 || ||||| || |||| |||| || || ||||| | ||||| ||| || || || Sbjct 88423 TGCAGCATCACCGATCAATCGTTCGGTATCAGTAAAGGCGACATAGCTTGGGGTAGTTCG 88364 Query 282790 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 282849 || || |||||||| |||| ||||| || || | | || | ||||| |||||| Sbjct 88363 GTTCCCCTGATCATTGACAATTATTTCCACCTTTCTGTGCTGGAAGACACCCACACAAGA 88304 Query 282850 AAAAGTTGTTCCTAAATCAATACCAA 282875 | | || || || | || ||| |||| Sbjct 88303 ATAGGTGGTGCCAAGATTAATGCCAA 88278 >seq26394 Length=17752 Score = 179 bits (198), Expect = 3e-39 Identities = 451/685 (66%), Gaps = 3/685 (0%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| ||||| || | || | |||| ||| | |||| | | || | || | | Sbjct 12679 TTGTCAAAGTCTTCTCCACGTAAGTGGGTATCTCCAGCTGTAGATTTGACCTCAAAGATT 12620 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 |||| |||| || | | | |||||| || |||||||| | |||||| || || Sbjct 12619 CCATTCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCACCTAAATCAAAGATCAGC 12560 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 ||||| ||||| | ||||| || | ||||| |||| |||||||||||| || Sbjct 12559 ACATTTCTTTCTGCTCCAACATTTTTGTCTAAGCCATAGGCAATAGCAGCAGCAGTCCGT 12500 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || | | ||||| | ||||| || |||||||| |||| |||||||| || || || Sbjct 12499 TCCT---TGATTCTAAGTACATTGAGCCCAGCAATAGTTCCAGCATCTTTGGTAGCCTGA 12443 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 | || ||||| ||||| || | || || || | ||| |||| || || || ||| Sbjct 12442 CGCTGAGAATCATTAAAGTAAACGGGTACTGTGACAACAGCATTGGTAACAGTCTTCCCA 12383 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | || || |||| ||| ||||| || | |||| ||| ||||| | | |||||| Sbjct 12382 AGGTAGGCTTCTGCTATTTCCTTCATCTTTGTCAAAACCATGGATGACACCTCCTCTGGA 12323 Query 282551 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 || | || | || | ||| | ||| || | || | || |||| Sbjct 12322 TAAAAACCTTTTGTCTCTCCCTTGTATTCTTCTTGAACCTTAGGCCTGCCTGCATCATTC 12263 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670 | || | || ||||||| |||||||| || || ||| |||| ||| || Sbjct 12262 ACCACCATGAAGGGCCAATGCTTCATATCAGACTGGACAACAGCATCATCAAATCTTCGT 12203 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | |||| |||||||| | || ||||| ||||| | |||| |||||| || Sbjct 12202 CCAATGAGGGGTTTGGCATCAAACACCGTGTTGGTGGGATTCATTGCAACTTGATTGTTT 12143 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || |||| | |||| ||| || || ||||| | ||||| || || || || Sbjct 12142 GCAACATCACGGATCAATCATTCGGTATCAGTAAAGGCGACATAGCTAGGTGTAGTTCGG 12083 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || || |||||||| ||||| ||||| || || || | || | ||||| |||||| | Sbjct 12082 TTCCCCTGATCATTGGCAATTATTTCCACCTTTCCGTGCTGGAAGACACCCACACAAGAA 12023 Query 282851 AAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | |||||| |||| Sbjct 12022 TAGGTGGTGCCAAGATCAATGCCAA 11998 >seq16687 Length=60490 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||||||||| ||||| |||||||| | ||| Sbjct 60103 TTTTTGTCTAAGCCATAGGCAATAGCAGCAGCAGTTGGCTCATTGATAATTCTAAGTACA 60044 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||||||| |||| |||||||| || || || | || ||||| ||||| || Sbjct 60043 TTGAGCCCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAATCATTAAAGTAA 59984 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | ||| |||| Sbjct 59983 GCGGGTACTGTGACAACAGCAT 59962 >seq3457 Length=160540 Score = 104 bits (114), Expect = 2e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || || ||||||||||||| ||||||||||| || ||| | || |||||| | Sbjct 132588 TGTACACTTATCCTGACAGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 132647 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | || || |||||||| |||||||||||| | | |||||| | Sbjct 132648 GTGGTTGGGAGAGACAAGTACGGGGTTTTCCCTCTTAGAGGAAAAATGCTTAATGTTCGA 132707 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 132708 GAAGCTTCTCATAAA 132722 >seq6954 Length=129221 Score = 95.1 bits (104), Expect = 9e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 |||| |||| || ||||| ||||| ||||| ||||||||| | || || | || || Sbjct 71686 TGTAATAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCCAAGTCAT 71745 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 ||||||||| ||||| ||| | || ||| ||||| || || || |||||||| || || Sbjct 71746 TCATTACGGTGCTCCTAAGGAAATGGAATCATATTACCAGGAGATCGGTAGAGCTGGCCG 71805 Query 131296 TGATGGA 131302 ||||||| Sbjct 71806 TGATGGA 71812 >seq17850 Length=47146 Score = 89.7 bits (98), Expect = 4e-12 Identities = 119/163 (73%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 |||||||| |||| || | ||||||| ||| || | |||||||| || ||||| || Sbjct 23958 TCATTAATGATTCCCAGGATATTAAGATCAGTGATGATCCCTGCATCCTTGGTGGCCTGA 23899 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 | |||||||| || || || || ||||||||||| || |||| | ||||| |||||| Sbjct 23898 CACTGTGAATCATTTAAGTAGGCCGGAACAGTAATTACTGCAT-TTCTACTTTTTTTCCC 23840 Query 282491 ATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCAT 282531 || | |||| || || |||||| || |||| || ||| Sbjct 23839 CTAAATAGGCTTCAGCAAATTCTTTCATCTTGCTTAGAACCAT 23797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3728820067893882