Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq498 206 2e-48 >seq498 Length=273875 Score = 206 bits (228), Expect = 2e-48 Identities = 319/448 (71%), Gaps = 27/448 (6%) Strand=Plus/Plus Query 329 TTAAGGCTCTTTGCATTCCTGCCATTC-AAAAGGAACAGGGTCAACCACATGGTCTTCAG 387 |||||||| ||||| ||||||||| ||||||| |||| ||||||| |||| || | Sbjct 42716 TTAAGGCTTCACGCATTTCTGCCATTCCAAAAGGACCAGGTTCAACCAGATGGCTTTAAA 42775 Query 388 TGACCTTCCAGGCTTCAGTGCCCACTAATTT--------CAGGCACTTTGAAAACATTTC 439 |||||| | |||| ||||| || | |||| |||||||| ||||||| ||| Sbjct 42776 TGACCTACTGGGCTCCAGTGTTCAATGATTTAAACAGATCAGGCACTCTGAAAACTTTTT 42835 Query 440 TAAAACACACTGTATGAA-CACttttttttGATAGCTGTCTGTAGGCATAGAAA------ 492 |||| | || ||||| | ||| ||| | |||| |||||||||| ||||| Sbjct 42836 AAAAATAGACACGATGAAGCTCTTACATTTAA-AGCTATCTGTAGGCACAGAAACTTTTG 42894 Query 493 TGTCTGGTGCGCGTTGCAATTCAAGTTTTTTGAGATGGTCCATGACATCAGTAAAACT-- 550 | |||||| | || | || || ||||| |||||||||| |||| || | |||| Sbjct 42895 TTTCTGGTTCATGTCGAAACTCGAGTTTACTGAGATGGTCTATGAGGGCA--ACAACTTG 42952 Query 551 ATTTGTGTCATTAAAAAATGATTTGATGGCTCTAAAATAAGGCAGGATGGCTGAACTGTT 610 | | ||| || |||| || |||||| |||| ||||||||| | ||||||| |||| Sbjct 42953 AGCTTTGTTATCGAAAAGTGGTTTGATCACTCTGCAATAAGGCAAGGTGGCTGAGCTGTC 43012 Query 611 GATGTTGTGTGGTGGCTGGGGGCTCACAGAAAAGCACTGCATGCGGCACGTGCATGATTT 670 |||||||| ||| | |||||| ||| || || ||| |||| || || || |||| Sbjct 43013 GATGTTGTATGGCAGTTGGGGGTTCAGAGCGAAACACGGCATCTGGTACTGGCTGGATTC 43072 Query 671 TACTAATCCCTTATTCTCTTTCTGCTTCTGTGGAAGGAGA--GGAAA-TGGGTGAGCATT 727 | ||| | ||||| ||||| ||||| |||||| ||||| |||||||||||| Sbjct 43073 CGGCACTCCGCT---CTCTTCCTGCTGCTGTGTAAGGAGGAGGGAAAGTGGGTGAGCATT 43129 Query 728 AGTGTTGTAAAGCAGTCAGAAACCCTGA 755 ||| ||| ||| ||| |||||| || || Sbjct 43130 AGTTTTGCAAAACAGCCAGAAAACCCGA 43157 Score = 201 bits (222), Expect = 1e-46 Identities = 208/270 (77%), Gaps = 7/270 (3%) Strand=Plus/Plus Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130 ||||||| ||||||||||||||||||| ||||||| |||| || | | | |||||||| Sbjct 44364 CCACAGCCCTAGCTTCTGGTCTGAAAA-GAGTAGGCTTCTTCTGGGGGCAATGGAAGGCA 44422 Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGTT 1190 ||||||||||| ||||||||||| |||||| | |||||||||| || || | || |||| Sbjct 44423 TTTTAAAGAAATGGCTTAGAAAAGAAATCTCGAGGGCACTTACGTAGTCATTCAAGAGTT 44482 Query 1191 TTGAAAATGAGAACTGTAGTTCTGTGATTACAGCTGATTGTATGTCCCGTGGTAG----T 1246 | ||| ||| || ||| ||| |||||| |||| |||| | ||| || ||| | Sbjct 44483 TCTCAAACGAGGACCGTAATTCCTTGATTATAGCTTGTTGTTTATCCGGTCCTAGCACAT 44542 Query 1247 GGATGGCCG--TGGGAGGAGAGCAAGGCTCCGGAACAGCAGAGCAGGAACAGGGCAAGCC 1304 | |||| |||||||| ||||||||||| |||| ||| |||||||||||||||| || Sbjct 44543 AGGGTGCCGTATGGGAGGACAGCAAGGCTCCCGAACGGCACAGCAGGAACAGGGCAAACC 44602 Query 1305 CTGAAGATTTTGTAAAAATAGAGTAATGCC 1334 | |||| || | ||| || || ||||| Sbjct 44603 TGGCAGATCCTGGAGAAAGAGGGTGATGCC 44632 Score = 102 bits (112), Expect = 7e-17 Identities = 91/114 (80%), Gaps = 4/114 (4%) Strand=Plus/Plus Query 166 CCACACACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTT 225 |||||||||| || |||||||| ||| |||||||| || ||| |||||||||||| ||| Sbjct 42355 CCACACACAAAATGCAAAACAGAGTATGAGAAAAATACAATATCATTTATTAAATAGTTT 42414 Query 226 TCAAGGGCTTCTTTAAGAAGCATTAACAATCTAACAACATTTTATAAATAACAA 279 |||||||| || ||| | |||||||||||| | || | ||||||| ||| Sbjct 42415 CCAAGGGCTCCTCCAAGGACCATTAACAATCTCA----ATATGATAAATATCAA 42464 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 22/236 (9%) Strand=Plus/Plus Query 1536 CTAGAGTGAGATGTGCTCGCTATACTTTTAGGGAACTGTATATAAAGGGCTAGTTGTAAG 1595 || ||| |||||||||||| | | || ||| || ||||||||||| | | | || Sbjct 45119 CTGGAGCCAGATGTGCTCGCCGTGGTCTTCAGGAGCT--ATATAAAGGGCCAATGGCGAG 45176 Query 1596 GAGGAGCACTAAAAGTACCGCCCACGGTAAAGTCATTACT-----------CAGAAAACA 1644 || || |||| || || |||| || ||| |||||||| |||||| || Sbjct 45177 GAAGATCACT----GTCCCACCCATGGCAAAATCATTACTCAGCTTTTTCCCAGAAAGCA 45232 Query 1645 -TTTCAAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAAA---TGAAGT 1700 ||||||| | ||||| | | ||| | |||||| |||| |||||| | ||| || Sbjct 45233 CTTTCAAAAGTCTGCCACCCAAGGCTGGGTGAAAGCAGGGCTGGAAGGAGATGCTGAGGT 45292 Query 1701 TACCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGGGCACCCACA 1756 |||||| ||| |||||||| || ||| || | || ||||||| | ||||| |||| Sbjct 45293 TACCCTCAAGGTGGGCAGACGCCTGATTCAGTACAGATACACA-CAGGCACACACA 45347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437241266526000