Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq12339 136 4e-27 seq15 131 2e-25 seq4730 96.9 3e-15 seq11754 89.7 5e-13 seq732 89.7 5e-13 seq2586 87.8 2e-12 seq4599 86.0 6e-12 seq2697 82.4 7e-11 >seq12339 Length=50223 Score = 136 bits (150), Expect = 4e-27 Identities = 152/199 (76%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || ||||| |||| Sbjct 7537 GGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 7595 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| || |||||||||||||| || ||||||| || Sbjct 7596 CTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC-TGATCTTGGCCT 7654 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 7655 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 7714 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 7715 TCTTCACGAAGATCTGCAT 7733 >seq15 Length=680746 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || ||||| |||| Sbjct 219400 GGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 219342 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || |||||||||||||| || |||||| || Sbjct 219341 CTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCT 219282 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 219281 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 219222 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 219221 TCTTCACGAAGATCTGCAT 219203 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || ||||| |||| Sbjct 219628 GGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 219570 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || ||||||||||| || || |||||| || Sbjct 219569 CTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCT 219510 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 219509 TGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 219450 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 219449 TCTTCACGAAGATCTGCAT 219431 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || ||||| |||| Sbjct 219856 GGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 219798 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || ||||||||||| || || |||||| || Sbjct 219797 CTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCT 219738 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 219737 TCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 219678 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 219677 TCTTCACGAAGATCTGCAT 219659 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||||||||| || ||||| || || ||| | || || ||||| || || Sbjct 219171 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 219112 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || | ||||||||| || |||||||| || || || |||||| |||| Sbjct 219111 GCAAAGATCAGTCTCTGCTGGTCTGGTGGGATGCCCTCTTTTTCTTGGATCTTCCCCTTG 219052 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| |||||||||| || | ||||| ||| || || |||| || Sbjct 219051 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTC 218992 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 218991 TTCACGAAGATCTGCAT 218975 >seq4730 Length=198489 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| || | || || | |||||||| ||||| || ||||||||| Sbjct 50973 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 50914 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | ||| | ||| || | ||| || || |||| |||||| Sbjct 50913 TCCTGGATCTTGACCTTTACATTCTCTATCGTATCCGAGGGTTCGACCTCGAGAGTGACG 50854 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| || || || |||||||||||| Sbjct 50853 GTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATG 50818 >seq11754 Length=121357 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/198 (70%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||||||||| || |||||||| || ||| ||| || ||||| ||||| Sbjct 47227 GGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTCCAGCTGTTTGCC 47286 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| || ||||||||||| || || |||||| ||| Sbjct 47287 TGCAAACATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTT 47346 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| |||||||||| | | ||| ||||| ||||| || Sbjct 47347 CACATTCTTGATGGTGTCACTGGGCTCCACCTTCA-------GGTCTTGCCCGTCAGGGT 47399 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||| || | ||| Sbjct 47400 CTTCCCGAAGATTTACAT 47417 >seq732 Length=284533 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || |||||||||| || |||||||| | ||| ||| || ||||| ||||| Sbjct 44828 GTTGACTCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGCCGTCTTCCAGCTGTTTGCCT 44887 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||||| ||||||||| || |||||||||| ||| || |||||| ||| Sbjct 44888 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTT-CTTATCCTGGATCTTGGCCTTC 44946 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 | | ||| | ||||| ||| |||||| || | |||||||| | |||| ||||| Sbjct 44947 ACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGG-TCTGCCAGTCAG 45001 >seq2586 Length=172570 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || || || | | | || || || |||||||| Sbjct 46703 GTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 46761 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | |||||||| ||||| || ||||||||||| |||||| ||| Sbjct 46762 AGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTT 46821 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || || | || | ||| || || |||| |||| ||| || || ||| | || Sbjct 46822 TACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTCTGGGT 46881 Query 133643 TTTTACGAAAATCTGCA 133659 || ||||||||||||| Sbjct 46882 CTTCACGAAAATCTGCA 46898 >seq4599 Length=129898 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/199 (71%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || | ||| |||| Sbjct 43887 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCATCTGTTTGC 43829 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | | ||||| ||||| ||| | ||||||||||| || || |||||| || Sbjct 43828 CTGCAAAGAGGAGCCTCTGCTTGTC-AGCGGGATGCCTTCTTTATCCTGGATCTTGGCCT 43770 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | |||| | ||| |||||||||| | | ||||| ||| |||| |||||| | Sbjct 43769 GCACATTCTCA---GGCTCGCTGGGCTCCACCTTCAGGGTGATGGTCTTGCAGGTCAGGG 43713 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || | ||| |||||||| Sbjct 43712 TCTTCATGAAGATCTGCAT 43694 >seq2697 Length=152082 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| | || | || | |||||| | ||||| || ||||||| | Sbjct 60103 TCTTCCAGTTGCTTGCCAGTAAAACTCAGTCTTTGCTGGGCAGGAGGAATTCCTTCCTCG 60162 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||| || | ||| || || |||| |||||| Sbjct 60163 TCCTGGATCTTGGCCTTTACGTTTTCTATCGTATCCGAGGGTTCGACCTCGAGAGTGACG 60222 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || || |||||||||||||| Sbjct 60223 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 60257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481967171782680