Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq11145 286 4e-72 seq6540 197 2e-45 seq9961 122 1e-22 >seq11145 Length=73809 Score = 286 bits (316), Expect = 4e-72 Identities = 666/1001 (67%), Gaps = 9/1001 (1%) Strand=Plus/Minus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 |||||| |||||| | |||| ||| || | |||||||| || || | ||| ||| Sbjct 31187 CCAGGGCCTTATGCCTCAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCGATGTCCG 31128 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 ||||||||||| ||||||| ||| ||| | || |||| || | || |||| Sbjct 31127 TGTCGAACTTGTTGGCGAACAAGTGGTGCACACGCAGCA---TCCAGTTCAAGTCACCCG 31071 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 |||||| ||||||||||| |||||||| ||||||||||||||||| || |||| || | Sbjct 31070 CTCCGAAAACGCACACGGAGCGCACGTGGACGCCGCTGCACGGCGGGTAGGGGGCGCCCT 31011 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 | | || || || |||| |||||||| || ||||| | || || |||||||||| Sbjct 31010 TGGAAATGTCACCTTCAAAGTACTGCCACTTGACAAACCTGGCAATTGCTTGCATGTCGG 30951 Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 | | |||||||| | | | | || | || || || | || | ||||| | || Sbjct 30950 ACATATCGTACTTATGGCTTAAGGACAGTGACCCTGGGACTTCGGGGATCCTCTGAATAG 30891 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||| || | ||||| || || || || || || | ||||||||| |||| | Sbjct 30890 TGGCCCAGAGATACTCGTCCGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGTA 30831 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 ||| || | || | || || || ||| | || | ||| || || || | Sbjct 30830 TTTTTTCATTCTCGAGCACATACTCCACATACCTCCTACTGACCACAAAATAGGCACTGC 30771 Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538 | ||||||| ||| | | |||||| | |||||| ||| |||| | | Sbjct 30770 CTGAAAACAGAGGTGTTTCAAGAGGAGGATGTATTTTGTCGGTCCCCATGTTTGTCAACT 30711 Query 162539 TTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGTT 162598 |||| | ||||| | | ||| ||||||| | | ||| ||| | | | Sbjct 30710 TTCCATTCACGACTGCATAATGCTTTTTCCACCTTTCTTTTTTATTGGATGGCATTCTCT 30651 Query 162599 CGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGG 162658 | || ||||| | || ||| || | ||| |||| | || || || || |||| Sbjct 30650 CCGTTTCTAGGTTATTCTCGCCCATTAACGACTTGAGCTTCCTGACAATTTCCAGGTTGG 30591 Query 162659 TCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTC 162718 | |||| ||||| || | ||||||||||| || | || ||||| | || | | || Sbjct 30590 TTTTAATAGGAAAATCCATACCGCAGAGATTTATCAAGTACTTCCAGTCTGCGTTCATTC 30531 Query 162719 CGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGA 162778 ||| || ||||| | ||||| || || |||||||| || ||||| || || ||||| | Sbjct 30530 GGTAGAGGTCCTGCATGCAGTTGAGGTCAGCCTGGACCCGGCTCCAAGATGCATACACAA 30471 Query 162779 CGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCA--- 162835 ||||||||| | | |||| ||||||||||| |||||| || | || || |||| Sbjct 30470 CGCTCTCCAGCTGACTGGCCACAAAGACATTACTGAAACAGGATGCAATGCCAATCACCG 30411 Query 162836 CGGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAG 162895 |||||| || | || || | ||| |||| ||||| | ||| || | |||||||| Sbjct 30410 CGGCCAAAAAGGA-TTC--CTCTGATTTTGTATCCACGTGAATGCAATAGAAATTCTGAG 30354 Query 162896 GGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAG 162955 | || ||||||||||| | || || | ||| || || || || || ||||| | || Sbjct 30353 GCATATAAATGGCCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTACAG 30294 Query 162956 AATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAAAGTACTTGCGGT 163015 |||| ||||| || ||||| ||||| || ||| || | || || || ||||| | Sbjct 30293 AATATGCTATTGGAAACTCTGCCTCTTCCTTACTAAGGGGTTCTACAATATATTTGCGCT 30234 Query 163016 CCCTCACAAACGCCGCACAGTCCTCCGTCATGTTAACGTAG 163056 | | | || | ||||| || |||||||| | |||| Sbjct 30233 TCTTGATGAAAGAAGCACAATCACTGGTCATGTTTATGTAG 30193 >seq6540 Length=125837 Score = 197 bits (218), Expect = 2e-45 Identities = 237/322 (74%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 || |||| || || |||| | | || || || || || ||||| ||||| || | | Sbjct 78049 CAAAGAGAGTGAGGCAGGCTATTCATGAGATCTTCCCAGAACCAAAGGTATTGAAGAGGC 77990 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 || | |||| ||||| || |||| |||||| ||||| || || | || || || ||| Sbjct 77989 ACTTGTAACACCCTTCATCTTCCAAGGTGGTATTCCAGAAGGTAATGGTTGAGTTCATGA 77930 Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950 |||| || || || ||||| | | |||||| || | ||||||||| ||||| || || | Sbjct 77929 GTCCCAGCTGGGTGATGTTTATCTTGTCCTTATAGGCAGGCTGGACTACAACCCCATGGT 77870 Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010 ||| ||| || ||| ||||||||| ||||| |||||| || || ||||| || || | Sbjct 77869 TCTGGCTAAAGGTGATCATGTTTTCTGGGCTTACAGCCTTGATTTTTTGCCATGTCACAA 77810 Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070 | |||||||| | | ||| ||||||||||||||||||||||||||||||| || | Sbjct 77809 TCAAAACTTCCTGGGGATCTTGCAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAGCAACT 77750 Query 172071 CCCTTTCGTCTTGCGTTACCAC 172092 | ||| | ||||| || |||| Sbjct 77749 CTCTTACATCTTGGGTCTCCAC 77728 >seq9961 Length=70868 Score = 122 bits (134), Expect = 1e-22 Identities = 418/640 (65%), Gaps = 15/640 (2%) Strand=Plus/Plus Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946 ||||||||||||| ||| || | | ||||||||| | | || || | | | Sbjct 69268 TCCAGTTAAAGTAACTAAGGTATAATTTATTGTTTTTATCTACTTCCTTCAGATACTTTG 69327 Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006 | || || | || || | || || | ||| |||||||| | ||| | || | |||| Sbjct 69328 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 69387 Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066 | || || || || || |||| || | || | || || | || |||| || || Sbjct 69388 TCTCATAGTTTTCCCTAGATGGCCCCAAAACAACAGGCACAGAGCCAGCCAGAAAAGCAT 69447 Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126 |||||| ||||| || || || || |||| | ||||| ||||| | ||||| |||| Sbjct 69448 TGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAAAGATAAAATT 69507 Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184 | || | ||||| ||| || || || | | ||| | ||| ||||| | | | | Sbjct 69508 TGCAAGTAGATATGGTA--GGAATCAAATTTTTATCATTCACATACTCTCCAAATGCTTG 69565 Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243 ||| || ||| || || ||| ||| || ||||| ||| || || || || | | Sbjct 69566 CCCATAAGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATA-CTTGACCCTGGCAT 69624 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302 | || |||||| || || || |||||||| |||||||| |||||||| || || Sbjct 69625 GCTCAGGGTTCCAGTTACTTACAACCCAGCACACTAACTT-CTCTTTGCTTGGCAC---- 69679 Query 177303 TTC-GATACTAATGCAGTGTCT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCG 177360 ||| | || || | || | | || | ||| | | ||||| ||||| || ||||| | Sbjct 69680 TTCAAACACGAA-GGGGTTTGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTG 69738 Query 177361 AGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACCTTGTTTGAAGGGGC 177420 ||||||| | || || | || || ||||| || | || || || || ||| Sbjct 69739 AGTCGCGGCGATAAGTCAGAGTCAGGTTGAACAGATGCTCAATGCCGCTCTTCTGGGGTG 69798 Query 177421 TGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGGGTTCCG 177480 ||| | | || ||||| || |||||||| ||||| || || |||| ||| || | | | Sbjct 69799 TGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCTCGCCTGCT 69858 Query 177481 TAGGTAGAGTATAAGGATCTATACTTATCTCTCTGTGGTG 177520 ||||| | || |||| ||| || |||| ||| || Sbjct 69859 GAGGTAAATTAGTCAGATCCCAACTGATGTCTCGGTGATG 69898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576692676667200