Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6540 273 3e-68 seq4260 168 8e-37 seq4304 154 2e-32 seq211 149 7e-31 seq367 132 6e-26 seq7646 120 4e-22 >seq6540 Length=125837 Score = 273 bits (302), Expect = 3e-68 Identities = 252/319 (79%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 |||| |||||| |||| || | | |||||||||| || || || | | |||||| ||| Sbjct 77728 GTGGAGACCCAAGATGTAAGAGAGTTGCTGAACACACCTGCTTCTTTAAGATGCTCTCTG 77787 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | | ||||| || ||||||| || ||||| ||||||||| | | ||||| Sbjct 77788 CAAGATCCCCAGGAAGTTTTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCAGAA 77847 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||||| || |||||| | |||| ||||| || |||||||| || |||||||||||| Sbjct 77848 AACATGATCACCTTTAGCCAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGACAAG 77907 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||||||||| |||||| ||||||||||| || || |||||||||||||| Sbjct 77908 ATAAACATCACCCAGCTGGGACTCATGAACTCAACCATTACCTTCTGGAATACCACCTTG 77967 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 || || || ||||| ||||| |||||||| || |||||||| |||||||| ||||| | Sbjct 77968 GAAGATGAAGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCATGA 78027 Query 171372 GTGGCCTGCCTCACCCTCT 171390 | ||||||||||| |||| Sbjct 78028 ATAGCCTGCCTCACTCTCT 78046 Score = 134 bits (148), Expect = 2e-26 Identities = 162/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 171456 GCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAAAAC 171515 |||||||| ||||| | ||| ||| | |||||| | || |||||||| || || ||| Sbjct 81858 GCCAATGCTCGCCCAGC-CCTATGATCTCCTGGAAGGTCTCTGGGTCAGAGAT-GAGAAC 81915 Query 171516 AGTAGCGAGGTTCTTTCCCATTCT-AATGGAACTACTTCTGTAACCAGTGTACTCCAAGT 171574 |||| ||| | || || || | ||||| || || ||||| ||||| | ||||| | Sbjct 81916 AGTACTGAGAT-CTCTCACACCCCCAATGGGACAACGTCTGTCACCAGCATCCTCCAGAT 81974 Query 171575 TAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGAAA 171634 |||||||||||||||||| |||| |||||||| ||||| || || ||||||||| | Sbjct 81975 CAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGTCAGGTACTGCACCTGGGGAC 82034 Query 171635 TGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 ||| || ||| ||||||||||| | ||| |||| Sbjct 82035 TGTGACCGACTACAGGGAAACTGTGAACAAAGGTA 82069 Score = 105 bits (116), Expect = 8e-18 Identities = 122/161 (76%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 || |||||||| || || || || |||||| | | ||| |||||||| || ||||| || Sbjct 80876 GTACAGCCCACAGTATTCCTTCACTATAAACTATCTGAAGACCACCTAAATATCACTTGC 80935 Query 171453 TCTGCCAATGCCCGCCC--GCCACCTCAGATTTTTTGGA-AGATTTCGGGGTCAGAAATT 171509 ||||||||||| ||||| ||| ||| ||| | |||| || | || |||||||| ||| Sbjct 80936 TCTGCCAATGCTCGCCCTAGCC-CCTATGATCTCCTGGATAGGTCTCTGGGTCAGAGATT 80994 Query 171510 GAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTAC 171550 || ||||||| ||| |||| || || | ||||| || || Sbjct 80995 GAGAACAGTACTGAGATTCTCTCACACCCCAATGGGACAAC 81035 Score = 98.7 bits (108), Expect = 1e-15 Identities = 88/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 171285 ACCATCACTTTTTGGAATACCACCTTAGAGGACGAGGGGTGCT-ACAACTG-CCTCTTTA 171342 ||||| || || |||||||||||||| || || || ||||| | |||| || |||||| | Sbjct 78426 ACCATTACCTTCTGGAATACCACCTTGGAAGATGAAGGGTGTTTACAAGTGACCTCTTCA 78485 Query 171343 ACACCTTTGGGTCTGGGAAAATCTCGGGGGTGGCCTGCCTCACCCTCT 171390 | |||||||| |||||||| ||||| || | ||||||||||| |||| Sbjct 78486 ATACCTTTGGTTCTGGGAAGATCTCAGGAATAGCCTGCCTCACTCTCT 78533 >seq4260 Length=133197 Score = 168 bits (186), Expect = 8e-37 Identities = 137/166 (83%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| | ||||||||| ||||| || Sbjct 112051 CTTCAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAA 111992 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || |||||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct 111991 GGGCACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 111932 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 ||||||| |||||||| ||| |||||||| || || |||||| Sbjct 111931 CACCACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATG 111886 >seq4304 Length=228172 Score = 154 bits (170), Expect = 2e-32 Identities = 227/316 (72%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 146826 AAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGG 146885 ||| | ||| ||| |||| || || || | ||| || | | || |||||||| || Sbjct 3000 AAAGTTTTCAGCCTTGAAGTCATCGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTGG 2941 Query 146886 GAAGGGTCGGGGGT-TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGA 146944 ||| || | | | ||| | ||||| |||||||| |||| | ||| | ||||| | Sbjct 2940 GAAAGGCCTTGATTCTCCCTGA-AGCTGCATTTTCAGCAGCTCAATGTGATCAAGGTAAA 2882 Query 146945 CGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCA 147004 || || || |||| ||||| ||| |||| || ||||| ||||| || | ||| || | Sbjct 2881 TATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGA 2822 Query 147005 CCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCC 147064 ||||||||||||||| | |||||||| |||||||||| || | ||||||| |||| | Sbjct 2821 TCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGTCTC 2762 Query 147065 CCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGA 147124 | ||| |||||||||||| ||| || || || || |||||| || ||||| ||| Sbjct 2761 CTGACTTCTGGTACAGCT-GCAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAAGGG 2704 Query 147125 TGTGGCACGGCGGCAG 147140 |||||| | ||||| Sbjct 2703 CATGGCACAGGGGCAG 2688 >seq211 Length=434901 Score = 149 bits (164), Expect = 7e-31 Identities = 545/840 (65%), Gaps = 54/840 (6%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || |||||||| | |||| || | ||||||| ||||| | | |||||| Sbjct 31396 GTATTCCCTGGTGTTCACGGTTGGTCTGCTGGGCAATGTAGTGGTGGTGGTGATCCTCAC 31455 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||| ||||| | |||| |||| ||||||||||||| |||| |||| |||||| || || Sbjct 31456 AAAATACAACAAGCTCCGGATTATGACCAACATCTACCTGCTCAATCTGGCCATTTCCGA 31515 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 | |||| | | ||||| || || || |||||||||| | ||| |||| || Sbjct 31516 CTTGCTCTTCTTATTCACTCTGCCGTTCTGGATTCACT--ATGTTGGGTGGAA----TGA 31569 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 ||||| | |||||| ||||||||||| | || || | || ||| |||| Sbjct 31570 GTGGGTTTTTGGCCACCATATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGCTTGTA 31629 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909 ||| || || | || ||||| || |||| | ||| ||||||| || | ||| |||| Sbjct 31630 CAGTGAGATCTTCTTCATCATACTCCTGACCATAGACCGGTATCTGGCCATCGTGCACGC 31689 Query 8910 GGTGGCTTACAGGCTGGTCCGCGTGGTACCA--ATAGGCATCCTCGCCAGCCTCCTGGCC 8967 ||| | | | | ||| | |||| | || ||| || ||||| || | || Sbjct 31690 CGTGTTTGCCCTTCGAGCCCGGACG--ACCACTTTTGGTATCATCACCAGCATCTTCACC 31747 Query 8968 TGGATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCC 9027 ||| | ||||| | ||| | | || | || || |||||||| |||| ||| | | | Sbjct 31748 TGGGTCCTGGCAGGGTTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAGGAG 31807 Query 9028 ACAGGCAAGGGGGTCTGCCAAGCCTCCT---ACACAGACT----------TTTGGAAGGG 9074 | || |||| || |||| | || ||| | |||||| | Sbjct 31808 TTTGAACAGACTTTCTG-CAGTCCTCTTTACCCAAAGAATGGAGAGAATGCCTGGAAGTG 31866 Query 9075 GGTTGATGTTACCAGCATGA----CCATGGTCACCCTCATCCTGCCTTTGCTTATCATGG 9130 | ||| | || ||| || |||| | || |||||| |||| || |||| Sbjct 31867 TTTCCATGCTCTGAGGTTGAATATCCTGGGTCTCGCT----CTGCCTCTGCTCATTATGG 31922 Query 9131 CCTTCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAAC 9189 || ||||||||| |||||| || || || | | |||| || || | ||| Sbjct 31923 CCATCTGCTACTCAGGAATCATTAAAACACTGCTGAGATGCCC-CA----GTAAAAAAAA 31977 Query 9190 CTGC-ACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCC 9248 | | | ||| || ||||||||| |||| ||||| | | ||| | || |||| || Sbjct 31978 ATACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTCTTTATTTTCTGGACACC 32037 Query 9249 CTACAA---CGTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTGGGCCAGACTG 9305 |||||| || | ||| | | | || | |||| | || | | | | || || Sbjct 32038 CTACAATCTGGTTGTCCTCCTCTCA---ACTTTTCAAGTG--CA-CCTGGAGACTGAGTG 32091 Query 9306 TGAAGCGCGGCGCAG---GGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCAC 9362 ||| || | |||| | ||||| ||||| | ||||| | ||| ||||||||| ||| Sbjct 32092 TGA---GCAGAGCAGACAGCTGGACCTGGCCATGCTGGTGACGGAGGTGATCGCCTACAC 32148 Query 9363 CCACTGCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCCAACAGAACCT 9422 ||||||||| ||||||||||| |||||||| || || || || | ||||||| || |||| Sbjct 32149 CCACTGCTGTGTCAACCCCGTGATCTACGCCTTCGTTGGTGAGAGGTTCCAAAAGCACCT 32208 >seq367 Length=330550 Score = 132 bits (146), Expect = 6e-26 Identities = 128/167 (77%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| |||||||||||| Sbjct 10360 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 10419 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| |||| ||| | || ||||| |||| || ||||| || |||| Sbjct 10420 TGCCGAAGGCTGAGGACCA------------TGGCCCCAACATCAAAGAGCACGTGAACT 10467 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||| ||||| |||||||| || || |||| |||| ||| Sbjct 10468 CCCTGGGGGAGAAGCTGAAGACCCTCAGGCTGCAGCTGAGGCGCTGT 10514 Score = 107 bits (118), Expect = 2e-18 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| |||||||| |||||||| |||||||||||||| || || || ||||||| Sbjct 12796 AGCTCCAAGAGAAGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 12855 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||||| ||||||| |||||| |||| Sbjct 12856 TAGAAGCCTACATGATAACAAAGATGA 12882 >seq7646 Length=127101 Score = 120 bits (132), Expect = 4e-22 Identities = 205/296 (69%), Gaps = 10/296 (3%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||| ||| | ||||| || || ||||| ||| ||| |||| |||||||| Sbjct 113024 GTACTCGGTGGTATTTGTCTTTGGCCTGATAGGCAACATCCTAGTGGTCCTGGTCCTCAT 112965 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 | ||||||||||||| | |||||| | ||||| ||| ||||||||||| | ||| Sbjct 112964 GCAATACAAGAGGCTCAAAAGCATGACGAGCATCTACCTCCTCAACCTGGCCATGTCTGA 112905 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACT-GGT 8787 |||| | | | ||||| || ||||| |||||| ||| | | || || ||| ||| Sbjct 112904 CCTGATCTTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGCTGAAGGATGACTGGGT 112845 Query 8788 GGGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTG 8847 ||| | | |||||||||||||| | || |||| | ||| || Sbjct 112844 TTTTGGTA--------ATCACATGTGTAAGTTGCTCTCTGGGCTTTATTTCATGGGCTTG 112793 Query 8848 TACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903 ||||||| || | || ||||||||| |||| | |||||||| || || |||| Sbjct 112792 TACAGCGGGATCTTCTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATTGT 112737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581733473464800