Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2586 105 6e-18 seq23190 98.7 9e-16 seq15 98.7 9e-16 seq12339 95.1 1e-14 seq24761 93.3 4e-14 seq7607 89.7 5e-13 seq100962 86.0 6e-12 >seq2586 Length=172570 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || |||||| ||||||||||| || | | Sbjct 46673 CCACCACGAAGACTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 46732 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | |||||||| | |||| Sbjct 46733 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 46792 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | || | || | || | ||| ||| Sbjct 46793 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACC 46852 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || | ||||| || || |||||| || ||||| || ||||||| Sbjct 46853 TCGAGAGTGATGGTCTTCCCCGTCTGGGTCTTCACGAAAATCTGCA 46898 >seq23190 Length=44765 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 17142 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGAC 17083 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | | ||| | ||||| || ||||| |||| | || ||||| | |||| Sbjct 17082 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 17023 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | || | | || || | || ||| Sbjct 17022 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 16963 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | | ||||| || || ||||||| || ||||| ||||||||||| Sbjct 16962 TTGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 16916 >seq15 Length=680746 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || |||||||| || || ||||| Sbjct 219394 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219335 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || ||||| ||| |||||| ||||| | Sbjct 219334 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 219275 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 219274 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219215 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 219214 GAAGATCTGCAT 219203 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || |||||||| || || ||||| Sbjct 219850 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219791 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || || || ||| |||||| ||||| | | Sbjct 219790 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 219731 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 219730 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219671 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 219670 GAAGATCTGCAT 219659 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || |||||||| || || ||||| Sbjct 219622 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219563 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || || || ||| |||||| ||| | | Sbjct 219562 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTGACGTT 219503 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 219502 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219443 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 219442 GAAGATCTGCAT 219431 >seq12339 Length=50223 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || |||||||| || || ||||| Sbjct 7543 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 7602 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||||| ||| ||||||| ||||| | Sbjct 7603 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC-TGATCTTGGCCTTCACGTT 7661 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 7662 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 7721 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 7722 GAAGATCTGCAT 7733 >seq24761 Length=36067 Score = 93.3 bits (102), Expect = 4e-14 Identities = 157/226 (69%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | |||||||| | ||| | || | |||||||||||||||| || | Sbjct 10530 CCACCACAAAGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTAGTCAAAC 10589 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||||||| | | | Sbjct 10590 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAA 10649 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | || | | || || | ||| ||| Sbjct 10650 ATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 10709 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || | ||||| || || || |||| || ||||| || ||||||| Sbjct 10710 TCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 10754 >seq7607 Length=159759 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 35501 TCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 || |||| |||||||| | |||||||| | ||| | || ||||||| |||||||| Sbjct 70849 TCCTTATCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTCGAATGTTG 70790 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 | || | ||| || || | || ||||||||||| || ||||| |||| | |||||| Sbjct 70789 TGGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGG 70730 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||| ||||||||| |||||| Sbjct 70729 TCAGGAGGAATTACTTCCTTGTCCTGGATCTT 70698 >seq100962 Length=431 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 ||| | ||| |||| | ||||||| | ||| || ||| |||||||||||||||||| Sbjct 26 TTAGTACCAGCACGAAGTCTCAACAGAAGATGAAAAGTAGACTCCTTTTGAATGTTGTAG 85 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 || | ||| || || | || ||||| ||||| || ||||| | | | ||||||| Sbjct 86 TCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGGTTAGTCTTCGCTGGTCA 145 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683 ||||||| ||||| || |||||| ||| | | || | | || || | | Sbjct 146 GAAGGAATTACTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGT 205 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || ||||| | ||| | || || || ||| | |||| ||| |||||||| ||| Sbjct 206 TCGACCTCGAGAGTGGTGGTCTTCCCTGTCCGGATCTTCATAAAAATCTGCATCCTG 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449438080549560