Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1971 268 1e-66 seq2230 163 4e-35 seq3161 120 4e-22 seq4569 107 3e-18 >seq1971 Length=167910 Score = 268 bits (296), Expect = 1e-66 Identities = 419/599 (70%), Gaps = 3/599 (1%) Strand=Plus/Minus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 ||||| ||||| | |||||| |||||||| |||| ||||| ||||| ||||| | ||| Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || ||||||||||| || | ||| || || || || |||||||| ||||| | |||||| Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || |||||||||||||| ||||| |||| |||| || || | |||||||| | Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTA 91367 Query 39782 GTATCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838 | || || | | |||| | |||||||| || ||||||||||||||||| | Sbjct 91366 GCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCACT 91307 Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 || || | ||||| ||||| | | |||| | |||||||| || || || || Sbjct 91306 GTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATG 91247 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 | ||||| | |||||| |||| |||||||| | || || || || || || ||| | Sbjct 91246 AGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAATAA 91187 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 | ||||| ||||| || || ||| | || | ||| || | |||||||| ||||| Sbjct 91186 CGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTATG 91127 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078 | |||||| || ||| | || |||| ||| | | ||| || | || || || || Sbjct 91126 CTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAGGCTTC 91067 Query 40079 AATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 | | ||||| | || || || || | || || || ||||||||||| || || Sbjct 91066 AGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAA 91007 Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 | ||| || || || ||||| | ||| | ||||||||||| | ||||| || ||||| Sbjct 91006 GACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGACAAA 90948 Score = 125 bits (138), Expect = 1e-23 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| ||||| ||||| | ||| || ||||||||||| || ||||| || || || |||| Sbjct 88602 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 88543 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| |||||||||||||| ||||| ||||| ||||| | Sbjct 88542 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGG 88483 Query 39759 CAAC 39762 | || Sbjct 88482 CTAC 88479 >seq2230 Length=225668 Score = 163 bits (180), Expect = 4e-35 Identities = 444/668 (66%), Gaps = 14/668 (2%) Strand=Plus/Minus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCT---TGTGACATAACTCCCATTT 39326 ||| |||||| |||| || | ||| ||| ||| || || ||| | |||||||| Sbjct 225437 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTG-GACGTCACTCCCATCC 225379 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || || | || || | ||| | || || ||||| || |||||| ||| |||| | Sbjct 225378 TCTGATACTTGCCTACTCTCTTCCCAAAGAAGTTAGTCTTCCCTTCCG-TGAAATATCCT 225320 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||| ||||| | | | | || |||| || | || || | Sbjct 225319 CCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCACCTCCAGCATAA 225260 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||| ||||| || ||||| | ||| ||||||| | |||||||| || ||||| | Sbjct 225259 GTCTGTCTGCCACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCT 225200 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTT-ATTATC 39565 |||| || || || || || ||||| | ||| || ||| | ||| ||||| Sbjct 225199 CCACTGTCAGGGCTTCTGTGAGGAACTCGTGTTCTATC-CTAGCTGCACTGACGATTATT 225141 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | | ||| || || || || | | ||||| ||||| | |||||| ||| Sbjct 225140 TCTTTGACTCTCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAG 225081 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 ||||| |||| ||||| ||||| ||||| | || || ||||||||||| || | ||| Sbjct 225080 TCACAGTGTAAACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATC 225021 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 || || || || |||||||| ||||| | |||||||| |||||||||||||| ||||| Sbjct 225020 AGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCC 224961 Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTC 39802 |||| |||| || || | |||||||| | | || || | | |||| | Sbjct 224960 GCTGCGACAAAGGCTACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGCGC 224901 Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862 | |||||| || |||||||||||| |||| ||| || | |||| | ||| | Sbjct 224900 AAGGTCCAATCTGCCGCCTTCTTTACACAGGGCACTGTCTCACTGACATTGATGAG-GAG 224842 Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922 | |||| | |||||||| || | || | | | ||||| | |||||| ||| Sbjct 224841 TCCCTTTCTTTGGAATCTTTAATGTAGTTGTC-AATGAGAGACTGTCCATTTC-ACATGT 224784 Query 39923 ATGTTTTC 39930 |||||||| Sbjct 224783 ATGTTTTC 224776 >seq3161 Length=206284 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| |||| ||| |||||||| ||||| || || || | ||| || || ||||| | Sbjct 143141 CACCACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTTGCTGCCA 143082 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 | || ||||||||||| || | ||||| | || || ||| |||| ||||| || |||| Sbjct 143081 GGATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTAT 143022 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| ||| | ||| || || || | |||| ||||| || |||||||||| Sbjct 143021 CTAGTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 142971 Score = 118 bits (130), Expect = 1e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || ||||| ||||| || || ||||||||||| ||||| | || Sbjct 166545 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATAAGGTTCAATTGAC 166486 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||||| || ||||||||||| ||||| ||||| || || | | |||||| Sbjct 166485 TCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAACTG 166426 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 166425 TTTCTTATACCAT 166413 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| |||||||| || |||||| ||| | || || || ||||| || | Sbjct 168777 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 168718 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| || || |||||||| |||||||||||||| || || ||||| || | || | | Sbjct 168717 TCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 168658 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | |||| |||||||| | ||||||| ||| || || | || || |||| Sbjct 168657 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCCTCAGGAA 168607 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | || ||||| || || || ||||| || ||||| || || ||| Sbjct 147951 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAGAGAAGGTTG 147892 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 |||||||||||||| | || ||||| | ||||| || | | || | ||||||| Sbjct 147891 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATGCCCACAGATACCCTCATCAAC 147832 Query 70111 ATATGCTGAGGTCGTTC 70127 |||||||| |||| ||| Sbjct 147831 ATATGCTGTGGTCTTTC 147815 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || || || |||| | | | Sbjct 156252 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 156193 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| || ||||| | || || ||||||| || Sbjct 156192 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 156133 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 156132 TCCAGGTAAATAGC 156119 >seq4569 Length=138791 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| || ||||||||||| || || | || || Sbjct 31091 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCTTT 31032 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| || Sbjct 31031 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 30972 Query 39761 AC 39762 || Sbjct 30971 AC 30970 Score = 86.0 bits (94), Expect = 9e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 39428 AATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCA 39487 ||||| | |||||||| |||||| || || |||||||| || || |||||||| || Sbjct 43484 AATCCAAGTTCTGAAAGCAATCTGTCAGCTACAAATTCAATATACTGTTTCATCAAAACA 43425 Query 39488 CAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTC 39534 ||||||||||| ||||| |||||| | || || |||| |||||| Sbjct 43424 CAATTCATTCCGATGAGGCCAACTGGCAAGGCTTCTGTTAAAAACTC 43378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684843290997480