Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq4260 152 4e-32
seq4304 129 5e-25
seq3042 102 7e-17
>seq4260
Length=133197
Score = 152 bits (168), Expect = 4e-32
Identities = 132/164 (80%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || |||| ||| || |||||||| ||||| || | |||||||||||||||||||||
Sbjct 112047 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGC 111988
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| || || |||||||| || ||||||||||| ||||| || || ||||| |||| |
Sbjct 111987 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 111928
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105
||||| ||||| || | ||| |||||||| || || ||||||||
Sbjct 111927 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATGAG 111884
Score = 91.5 bits (100), Expect = 1e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||| || |||| || || || |||||||||||||| || || || || || || | ||
Sbjct 108828 CATCTCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATC 108769
Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342
|| ||| | ||| ||| ||| ||||||| ||||||| ||| || || || ||
Sbjct 108768 CCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTAGCATC 108709
Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|||||| || || ||||| ||| ||||| || | ||||||||| ||
Sbjct 108708 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 108661
>seq4304
Length=228172
Score = 129 bits (142), Expect = 5e-25
Identities = 347/525 (66%), Gaps = 12/525 (2%)
Strand=Plus/Minus
Query 29838 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGT 29897
||||||||| || | || | || ||||| | |||||| | || | || ||| ||||
Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885
Query 29898 AGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29957
| | || || ||||||| |||| ||| | || || || | || || |||| ||| |
Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825
Query 29958 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 30017
| |||||||| ||||| || | |||||||||||||| |||| || | || ||| |||
Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765
Query 30018 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30077
| || ||| ||||||| ||||| || || || || || ||||||| || || || |
Sbjct 2764 CTCCTGACTTCTGGTACAGCTG-CAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAA 2707
Query 30078 TGGCGTGGCACGGAGGAA-------GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30130
||| |||||| | || | | | ||||| | ||||| | ||||| ||
Sbjct 2706 GGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTT-CGATTCCAAGCA 2648
Query 30131 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30190
| | ||||| | |||||||| ||||| | |||| ||| | | ||||||||
Sbjct 2647 CGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGT 2588
Query 30191 TGATCCACCCCCATCCCCGAGT-AGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30249
|| || || || || || | | | | || || |||| || || | ||| |
Sbjct 2587 TGGTCTACTCCTTGACCTGAATAAATTTAAATCCACATCTTTGTATTCGGCCACCAAAAG 2528
Query 30250 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30309
||||||||| || | || || | || | | || ||||| ||| || ||
Sbjct 2527 CCTCCACTGAAAGCTATAAACTAGGCCTAAATTCCCTTCTTCTCTGGTGGAGAGTACCAG 2468
Query 30310 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354
||||||| ||||||| ||| |||| ||| |||||||| || ||
Sbjct 2467 GCTGTCCAAGAAGTCTCGGGACCCGTAGGCATCCCAGATTTTCAC 2423
>seq3042
Length=197541
Score = 102 bits (112), Expect = 7e-17
Identities = 116/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438
||||||||| || || || || || || || ||||| |||| || || ||||| ||
Sbjct 153744 ATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTC-CT 153802
Query 110439 C-AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 110497
| | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| |
Sbjct 153803 CTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 153862
Query 110498 TCTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530
|||| || ||| |||||||| || | |||||
Sbjct 153863 TCTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 153895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405119183867244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |