Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq4260 152 4e-32 seq4304 129 5e-25 seq3042 102 7e-17 >seq4260 Length=133197 Score = 152 bits (168), Expect = 4e-32 Identities = 132/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| ||||| || | ||||||||||||||||||||| Sbjct 112047 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGC 111988 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||| || ||||||||||| ||||| || || ||||| |||| | Sbjct 111987 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 111928 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 ||||| ||||| || | ||| |||||||| || || |||||||| Sbjct 111927 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATGAG 111884 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| || || || |||||||||||||| || || || || || || | || Sbjct 108828 CATCTCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATC 108769 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || ||| | ||| ||| ||| ||||||| ||||||| ||| || || || || Sbjct 108768 CCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTAGCATC 108709 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||| || || ||||| ||| ||||| || | ||||||||| || Sbjct 108708 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 108661 >seq4304 Length=228172 Score = 129 bits (142), Expect = 5e-25 Identities = 347/525 (66%), Gaps = 12/525 (2%) Strand=Plus/Minus Query 29838 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGT 29897 ||||||||| || | || | || ||||| | |||||| | || | || ||| |||| Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885 Query 29898 AGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29957 | | || || ||||||| |||| ||| | || || || | || || |||| ||| | Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825 Query 29958 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 30017 | |||||||| ||||| || | |||||||||||||| |||| || | || ||| ||| Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765 Query 30018 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30077 | || ||| ||||||| ||||| || || || || || ||||||| || || || | Sbjct 2764 CTCCTGACTTCTGGTACAGCTG-CAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAA 2707 Query 30078 TGGCGTGGCACGGAGGAA-------GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30130 ||| |||||| | || | | | ||||| | ||||| | ||||| || Sbjct 2706 GGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTT-CGATTCCAAGCA 2648 Query 30131 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30190 | | ||||| | |||||||| ||||| | |||| ||| | | |||||||| Sbjct 2647 CGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGT 2588 Query 30191 TGATCCACCCCCATCCCCGAGT-AGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30249 || || || || || || | | | | || || |||| || || | ||| | Sbjct 2587 TGGTCTACTCCTTGACCTGAATAAATTTAAATCCACATCTTTGTATTCGGCCACCAAAAG 2528 Query 30250 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30309 ||||||||| || | || || | || | | || ||||| ||| || || Sbjct 2527 CCTCCACTGAAAGCTATAAACTAGGCCTAAATTCCCTTCTTCTCTGGTGGAGAGTACCAG 2468 Query 30310 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 ||||||| ||||||| ||| |||| ||| |||||||| || || Sbjct 2467 GCTGTCCAAGAAGTCTCGGGACCCGTAGGCATCCCAGATTTTCAC 2423 >seq3042 Length=197541 Score = 102 bits (112), Expect = 7e-17 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || || ||||| |||| || || ||||| || Sbjct 153744 ATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTC-CT 153802 Query 110439 C-AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 110497 | | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| | Sbjct 153803 CTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 153862 Query 110498 TCTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 |||| || ||| |||||||| || | ||||| Sbjct 153863 TCTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 153895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405119183867244