Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 3e-13 seq23190 82.4 5e-11 >seq15 Length=680746 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 |||| |||| || |||||| || || || ||||| || || || || || ||| | Sbjct 220101 CGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 220042 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 ||||| || ||||| || ||||| || || | ||| ||||| || || | ||||||||| Sbjct 220041 TCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 219982 Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 || |||| || | || ||| | || ||||| | |||||| |||| ||| || Sbjct 219981 TCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 219923 Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || | || ||||| || |||||||| Sbjct 219922 GGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 219887 >seq23190 Length=44765 Score = 82.4 bits (90), Expect = 5e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||| | |||||| | ||| |||||| ||||||||||||||| || || | Sbjct 17144 CGCCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCG 17085 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || || | | ||| |||| || || ||||| || | | || ||||| || | Sbjct 17084 ACAGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAG 17025 Query 34598 GCACTCCCTCCTTGTCTGTGATCTT 34622 | | ||| |||||||| |||||| Sbjct 17024 GAATTCCTTCCTTGTCCTGGATCTT 17000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313806879397781