Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq15 109 5e-19 seq12339 102 7e-17 >seq15 Length=680746 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || || ||||||||||| || || || || Sbjct 219491 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219550 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| ||||||| | || | || ||||||||| Sbjct 219551 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219610 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||| | || | || | ||| || ||||||| || Sbjct 219611 ATCCAGAAAGAGTCGACCCTGCACCTTGTCCTCCGTCTGAGGGGTGGTAT 219660 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 219203 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219262 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || || |||||||| || || || || Sbjct 219263 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCAG 219322 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| ||||||| | || | || ||||||||| Sbjct 219323 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219382 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||| | || | || | ||| || ||||||| || Sbjct 219383 ATCCAGAAAGAGTCGACCCTGCACCTTGTCCTCCGTCTGAGGGGTGGTAT 219432 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || ||||||||||| || || || || Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219778 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| ||||||| | || | || ||||||||| Sbjct 219779 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219838 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || || ||||||||| Sbjct 219839 ATCCAGAAAGAGTCGACC 219856 >seq12339 Length=50223 Score = 102 bits (112), Expect = 7e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || ||||| || Sbjct 7733 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 7674 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || || |||||||| || || || || Sbjct 7673 GACACCATCGAGAACGTGAAGGCCAAGAT-CAGGATAAGGAAGGCATCCCCCCTGACCAG 7615 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| ||||||| | || | || ||||||||| Sbjct 7614 CAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 7555 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || || ||||||||| | || |||| | ||| || |||||||| Sbjct 7554 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGGC 7507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433646501881901