Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq4304 158 1e-33
seq4260 156 4e-33
>seq4304
Length=228172
Score = 158 bits (174), Expect = 1e-33
Identities = 361/541 (67%), Gaps = 23/541 (4%)
Strand=Plus/Plus
Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCT 34384
||||| |||||||| || ||||||| |||||||| |||||| | || || | |
Sbjct 2423 GTGAAAATCTGGGATGCCTACGGGTCCCGAGACTTCTTGGACAGCCTGGTACTCTCCACC 2482
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
| || || || | || |||| || || | || |||||||| | || | ||| ||
Sbjct 2483 AGAGAAGAAGGGAATTTAGGCCTAGTTTATAGCTTTCAGTGGAGGCTTTTGGTGGCCGAA 2542
Query 34445 TATCGGGGGAGCGAAGCGGACT-------ATTCGGGACAGGGAGCGGACCAGCTGCAGTA 34497
|| | || | ||| | |||| || || |||| ||||| ||||| |
Sbjct 2543 TAC------AAAGATGTGGATTTAAATTTATTCAGGTCAAGGAGTAGACCAACTGCAAAA 2596
Query 34498 CGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAA 34557
||||| ||||| | || |||| ||| |||||||| ||| | | | || |||||
Sbjct 2597 GGTGATTGACACAATCAAAACCAACCTTGAAGACAGAAGAATCATTCTACGTGCTTGGAA 2656
Query 34558 CCCGAAGGATCTCCCTCTGATGGCGCTCCCCCC-------GTGCCACACCCTCTGCCAAT 34610
| ||| ||||| ||||| || | | || ||| |||||| |||| ||||| |
Sbjct 2657 TC-GAAAGATCTTCCTCTCATACCCCACCACCCTGCCCCTGTGCCATGCCCTTTGCCACT 2715
Query 34611 TCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGT 34670
||||||| ||| || ||||||||| |||| || || || ||||||| |||
Sbjct 2716 TCTACGTGATGAACCATGA-CTGTCCTGC-AGCTGTACCAGAAGTCAGGAGACAGGGGCC 2773
Query 34671 TAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCG 34730
| | ||| | |||||||| || || || || |||||||| ||||||||||| || ||
Sbjct 2774 TGAGTGTGTCCTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATCGCACACATCA 2833
Query 34731 TGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACC 34790
|| || || || || || || || ||||| ||||| ||||| ||||| | |
Sbjct 2834 CAGGCCTGAAGCCAGGTGACTCTGTACACACTTTGGGAGATGCACATATTTACCTTGATC 2893
Query 34791 ACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAA 34850
|||| |||| ||| || ||||| || |||| | | || ||||| |||||||||
Sbjct 2894 ACATTGAGCTGCTGAAAATGCAGCTTCAGGGAGAATCAAGGCCTTTCCCAAAGCTCAAAA 2953
Query 34851 T 34851
|
Sbjct 2954 T 2954
Score = 158 bits (174), Expect = 1e-33
Identities = 361/541 (67%), Gaps = 23/541 (4%)
Strand=Plus/Minus
Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553
|||||||||| ||||| || | | |||| || ||||| || ||| |||| |||
Sbjct 2954 ATTTTGAGCTTTGGGAAAGGCCTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATG 2895
Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613
|| | ||||| ||||| ||||| ||||| || || || || || || || ||
Sbjct 2894 TGATCAAGGTAAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCT 2835
Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673
|| || ||||||||||| |||||||| || || || || |||||||| | ||| |
Sbjct 2834 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTC 2775
Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733
| ||| ||||||| || || || |||| ||||||||| || ||| ||||||
Sbjct 2774 AGGCCCCTGTCTCCTGACTTCTGGTACAGCT-GCAGGACAG-TCATGGTTCATCACGTAG 2717
Query 6734 AATTGGCAGAGGGTGTGGCAC-------GGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|| ||||| |||| |||||| ||| || | | || ||||| ||||| ||| |
Sbjct 2716 AAGTGGCAAAGGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTTC-G 2658
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||| || | | | ||| |||||||| ||| |||| || | ||||| |||||
Sbjct 2657 ATTCCAAGCACGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCAC 2598
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAAT-------AGTCCGCTTCGCTCCCCCGAT 6899
| ||||| ||||| |||| || || |||| | ||| | || | |
Sbjct 2597 CTTTTGCAGTTGGTCTACTCCTTGACCTGAATAAATTTAAATCCACATCTTT------GT 2544
Query 6900 ACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC 6959
| || ||| | || | |||||||| || | || || |||| || | || || || |
Sbjct 2543 ATTCGGCCACCAAAAGCCTCCACTGAAAGCTATAAACTAGGCCTAAATTCCCTTCTTCTC 2484
Query 6960 GAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019
| | || || | |||||| |||||||| ||||||| || |||||||| ||||
Sbjct 2483 TGGTGGAGAGTACCAGGCTGTCCAAGAAGTCTCGGGACCCGTAGGCATCCCAGATTTTCA 2424
Query 7020 C 7020
|
Sbjct 2423 C 2423
>seq4260
Length=133197
Score = 156 bits (172), Expect = 4e-33
Identities = 131/161 (81%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||| ||||||| ||||| || ||||||||||| |||| ||||| |||||||| | |||
Sbjct 111875 GATGTCCCTCTCATGGCCCTACCCCCGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAAC 111934
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || ||||||||||| | || ||||| ||
Sbjct 111935 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTT 111994
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||||| |||||||| ||||||||||| ||
Sbjct 111995 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 112035
Score = 156 bits (172), Expect = 4e-33
Identities = 131/161 (81%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| ||||| || || ||||| || ||||| || | |||
Sbjct 112035 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGCACACCCAGGCCC 111976
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||||| || | || || ||||||||||||||||| || ||| | |||||||| |||
Sbjct 111975 ATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 111916
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| ||||||||||| || ||||| ||||||| |||
Sbjct 111915 CAAAGGGCATGGCACGGGGGTAGGGCCATGAGAGGGACATC 111875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 446914491773040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |