Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4304 158 1e-33 seq4260 156 4e-33 >seq4304 Length=228172 Score = 158 bits (174), Expect = 1e-33 Identities = 361/541 (67%), Gaps = 23/541 (4%) Strand=Plus/Plus Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCT 34384 ||||| |||||||| || ||||||| |||||||| |||||| | || || | | Sbjct 2423 GTGAAAATCTGGGATGCCTACGGGTCCCGAGACTTCTTGGACAGCCTGGTACTCTCCACC 2482 Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 | || || || | || |||| || || | || |||||||| | || | ||| || Sbjct 2483 AGAGAAGAAGGGAATTTAGGCCTAGTTTATAGCTTTCAGTGGAGGCTTTTGGTGGCCGAA 2542 Query 34445 TATCGGGGGAGCGAAGCGGACT-------ATTCGGGACAGGGAGCGGACCAGCTGCAGTA 34497 || | || | ||| | |||| || || |||| ||||| ||||| | Sbjct 2543 TAC------AAAGATGTGGATTTAAATTTATTCAGGTCAAGGAGTAGACCAACTGCAAAA 2596 Query 34498 CGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAA 34557 ||||| ||||| | || |||| ||| |||||||| ||| | | | || ||||| Sbjct 2597 GGTGATTGACACAATCAAAACCAACCTTGAAGACAGAAGAATCATTCTACGTGCTTGGAA 2656 Query 34558 CCCGAAGGATCTCCCTCTGATGGCGCTCCCCCC-------GTGCCACACCCTCTGCCAAT 34610 | ||| ||||| ||||| || | | || ||| |||||| |||| ||||| | Sbjct 2657 TC-GAAAGATCTTCCTCTCATACCCCACCACCCTGCCCCTGTGCCATGCCCTTTGCCACT 2715 Query 34611 TCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGT 34670 ||||||| ||| || ||||||||| |||| || || || ||||||| ||| Sbjct 2716 TCTACGTGATGAACCATGA-CTGTCCTGC-AGCTGTACCAGAAGTCAGGAGACAGGGGCC 2773 Query 34671 TAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCG 34730 | | ||| | |||||||| || || || || |||||||| ||||||||||| || || Sbjct 2774 TGAGTGTGTCCTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATCGCACACATCA 2833 Query 34731 TGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACC 34790 || || || || || || || || ||||| ||||| ||||| ||||| | | Sbjct 2834 CAGGCCTGAAGCCAGGTGACTCTGTACACACTTTGGGAGATGCACATATTTACCTTGATC 2893 Query 34791 ACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAA 34850 |||| |||| ||| || ||||| || |||| | | || ||||| ||||||||| Sbjct 2894 ACATTGAGCTGCTGAAAATGCAGCTTCAGGGAGAATCAAGGCCTTTCCCAAAGCTCAAAA 2953 Query 34851 T 34851 | Sbjct 2954 T 2954 Score = 158 bits (174), Expect = 1e-33 Identities = 361/541 (67%), Gaps = 23/541 (4%) Strand=Plus/Minus Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553 |||||||||| ||||| || | | |||| || ||||| || ||| |||| ||| Sbjct 2954 ATTTTGAGCTTTGGGAAAGGCCTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATG 2895 Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613 || | ||||| ||||| ||||| ||||| || || || || || || || || Sbjct 2894 TGATCAAGGTAAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCT 2835 Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673 || || ||||||||||| |||||||| || || || || |||||||| | ||| | Sbjct 2834 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTC 2775 Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733 | ||| ||||||| || || || |||| ||||||||| || ||| |||||| Sbjct 2774 AGGCCCCTGTCTCCTGACTTCTGGTACAGCT-GCAGGACAG-TCATGGTTCATCACGTAG 2717 Query 6734 AATTGGCAGAGGGTGTGGCAC-------GGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 || ||||| |||| |||||| ||| || | | || ||||| ||||| ||| | Sbjct 2716 AAGTGGCAAAGGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTTC-G 2658 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 ||||| || | | | ||| |||||||| ||| |||| || | ||||| ||||| Sbjct 2657 ATTCCAAGCACGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCAC 2598 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAAT-------AGTCCGCTTCGCTCCCCCGAT 6899 | ||||| ||||| |||| || || |||| | ||| | || | | Sbjct 2597 CTTTTGCAGTTGGTCTACTCCTTGACCTGAATAAATTTAAATCCACATCTTT------GT 2544 Query 6900 ACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC 6959 | || ||| | || | |||||||| || | || || |||| || | || || || | Sbjct 2543 ATTCGGCCACCAAAAGCCTCCACTGAAAGCTATAAACTAGGCCTAAATTCCCTTCTTCTC 2484 Query 6960 GAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019 | | || || | |||||| |||||||| ||||||| || |||||||| |||| Sbjct 2483 TGGTGGAGAGTACCAGGCTGTCCAAGAAGTCTCGGGACCCGTAGGCATCCCAGATTTTCA 2424 Query 7020 C 7020 | Sbjct 2423 C 2423 >seq4260 Length=133197 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||| ||||||| ||||| || ||||||||||| |||| ||||| |||||||| | ||| Sbjct 111875 GATGTCCCTCTCATGGCCCTACCCCCGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAAC 111934 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || ||||||||||| | || ||||| || Sbjct 111935 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTT 111994 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 111995 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 112035 Score = 156 bits (172), Expect = 4e-33 Identities = 131/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || ||||| || ||||| || | ||| Sbjct 112035 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGCACACCCAGGCCC 111976 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| || | || || ||||||||||||||||| || ||| | |||||||| ||| Sbjct 111975 ATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 111916 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| ||||||||||| || ||||| ||||||| ||| Sbjct 111915 CAAAGGGCATGGCACGGGGGTAGGGCCATGAGAGGGACATC 111875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446914491773040