Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq6540 196 4e-45
seq3296 190 2e-43
seq6538 174 1e-38
seq3042 158 1e-33
seq17760 118 9e-22
>seq6540
Length=125837
Score = 196 bits (216), Expect = 4e-45
Identities = 197/256 (77%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 1275 CCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATG 1334
|| || |||||| | ||||| |||||||||||| | || || ||||||||||||||||
Sbjct 77794 CCCCAGGAAGTTTTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCAGAAAACATG 77853
Query 1335 GCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAAC 1394
||| ||||| | |||| |||||||| || ||||| || || || || || || |||
Sbjct 77854 ATCACCTTTAGCCAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGACAAGATAAAC 77913
Query 1395 ATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGAT 1454
|| || |||| ||||| ||| |||| || ||||||||||| || || ||||| |||
Sbjct 77914 ATCACCCAGCTGGGACTCATGAACTCAACCATTACCTTCTGGAATACCACCTTGGAAGAT 77973
Query 1455 GAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGG 1514
|||||||| |||||||| | || || || ||||| ||||||||||| ||| ||||||
Sbjct 77974 GAAGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCATGAATAGCC 78033
Query 1515 TGTCTAACCCTTTTTG 1530
|| || || || ||||
Sbjct 78034 TGCCTCACTCTCTTTG 78049
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/111 (79%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 1422 ACTATAACCTTCTGGAACACAACATTGGATGATGAAGGGTGCT-ACAAGTGTT-TATTTA 1479
|| || ||||||||||| || || ||||| ||||||||||| | ||||||| | || |
Sbjct 78426 ACCATTACCTTCTGGAATACCACCTTGGAAGATGAAGGGTGTTTACAAGTGACCTCTTCA 78485
Query 1480 ACACTTTTGGATCTGGGAAGATGTCAGGAATAGGGTGTCTAACCCTTTTTG 1530
| || ||||| ||||||||||| |||||||||| || || || || ||||
Sbjct 78486 ATACCTTTGGTTCTGGGAAGATCTCAGGAATAGCCTGCCTCACTCTCTTTG 78536
>seq3296
Length=145999
Score = 190 bits (210), Expect = 2e-43
Identities = 382/557 (69%), Gaps = 16/557 (3%)
Strand=Plus/Plus
Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199
|||||||| || ||||| || | || |||||||| || || || || | |||
Sbjct 31040 CTAAACTGCATCATCGCTGTGTCCCAGAACATGGGCATCGGCAAGAATGGGGACCTG--- 31096
Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256
||| || || | ||||||| | |||| |||| |||||| | | |||||
Sbjct 31097 --GCCCCCGCTCAGGAATGAATACAGGTATTTCCAAAGAATGACCACAACCTCTTCAGTA 31154
Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316
|| ||||||||| | || |||||||| || ||||| ||||| || ||| ||| | |
Sbjct 31155 GAAGGTAAACAGAATTTGGTGATTATGGGTAGGAAGACCTGGTTCTC-CTTTCCAG-AGA 31212
Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374
|| | | ||||| || |||||||| ||| | |||||||| ||| | || || || || |
Sbjct 31213 AGAATCGACCTTTAAAGAACAGAATTAATATAGTTCTCAGCAGAGAACTCAAGGAACCTC 31272
Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA- 2433
||| || | || ||| |||| |||||| | ||| | || || ||| | || |
Sbjct 31273 CACAGGGAGTGCATTTTCTTGCCAAAAGTCTGGATGATGC-CTTAAAACTCACCGAGCAA 31331
Query 2434 CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAG 2493
|||||||||| | | | ||||| | | |||||||| | || || || ||||| || ||
Sbjct 31332 CCAGAATTAACAAATAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCTGTTTACAAG 31391
Query 2494 GAGAGCATTA-CAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATT 2552
|| || | |||| | || | | | || ||| | |||||||| |||| ||||
Sbjct 31392 GAAGCCAGGAGCAAG-CCAGGCCATCTTAGTCTATTTGTGACAAGGATCATGCAGGAATT 31450
Query 2553 TGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATT 2612
|||| |||| ||| || ||||||||| || | ||||||||| || | ||||
Sbjct 31451 TGAAGGTGACACAATTTTTCCAGAAATTGATTTGGAAAAATACAAATTCCTCCCAGAATA 31510
Query 2613 TCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATA 2672
|||||| ||||| |||| || || || || || || |||| |||||||||| ||||
Sbjct 31511 TCCAGGGGTTCCTTCTGATGTCCAGGAGGAGAAAGGCATTAAGCACAAATTTGAAGTATA 31570
Query 2673 TGaaaaaaaaaCATAAT 2689
|||||| || | ||||
Sbjct 31571 TGAAAAGAACAATTAAT 31587
>seq6538
Length=202454
Score = 174 bits (192), Expect = 1e-38
Identities = 361/526 (69%), Gaps = 15/526 (3%)
Strand=Plus/Plus
Query 2167 AATATGGGCATTGGAAACAAGGGAAAACTGCCATGGCCTCCTCTTAAAAATGAATTTAAA 2226
|| |||||||| | || || || | ||||| ||||| | || | ||||||| |
Sbjct 67729 AACATGGGCATCAGCAAGAACGGGGACCTGCCCTGGCCCTCGCTCAGGAATGAATACAGG 67788
Query 2227 CATTTTCAAAAAATGAC---ATCTTCTTCCACTGACTTAAAACAGAATGTTGTAATTATG 2283
|||| || | |||||| | | ||||| || ||||||||| | || ||||||
Sbjct 67789 TATTTCCAGAGAATGACCACAACCTCTTCAGTAGAAGGTAAACAGAATTTGGTGATTATG 67848
Query 2284 GGAAGAAAGACATGGTTTTCACTTC---CCATTAAAAGCA--GGCCTTTGAACAACAGAA 2338
|| || || || ||||| | ||| ||| | ||| | | ||||| | ||||||
Sbjct 67849 GGTAGGAAAACCTGGTTCGCCATTCATTCCAG-AGAAGAATCGACCTTTAAGGGACAGAA 67907
Query 2339 TAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTTGCAA 2398
| || | ||||||| |||| | || || || || |||| || ||||| ||| |||| |
Sbjct 67908 TTAACATAGTTCTCATTAGAGAACTCAAGGAACCTCCACAGGGAGCTCATTTTCTTGCCA 67967
Query 2399 AAAGTATAGATCACGCTCTGGAAATTATAAT-AG-GACCAGAATTAAAAGACAGGGTGGA 2456
||||| | ||| |||| || ||| | || | || |||||||||||| | | | |||||
Sbjct 67968 AAAGTCTGGATGACGC-CTTAAAACT-TACTGAGCGACCAGAATTAACAAATAAAGTGGA 68025
Query 2457 TAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTA-CAAGATCTTGCA 2515
| | |||| ||| | | || || ||||| ||| |||| || | |||| | ||
Sbjct 68026 CATGGTTTGCATAGTGGCGGGCAGTTCTGTTTATAAGGAAGCCACGAACAAGC-CAGGCC 68084
Query 2516 AACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCAG 2575
| | | || || | |||||||| |||| |||||||| |||| |||| || |||
Sbjct 68085 ACCTTAGACTATTCGTGACAAGGATCATGCAGGAATTTGAAAGTGACACATTTTTTCCAA 68144
Query 2576 AAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTGC 2635
||||| || | ||||| |||| | | |||| ||||||||||| |||| ||| |
Sbjct 68145 AAATTGATTTGGAAAAATATAAACTTATCCCAGAATATCCAGGTGTTCTTTCTGACGTCC 68204
Query 2636 AAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681
| || || || || |||| ||||||||||| |||||||||| ||
Sbjct 68205 AGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGAAAAGAA 68250
>seq3042
Length=197541
Score = 158 bits (174), Expect = 1e-33
Identities = 314/462 (68%), Gaps = 5/462 (1%)
Strand=Plus/Minus
Query 2194 CTGCCATGGCCTCCT-CTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTC 2249
||||| |||| |||| || | ||||||| | |||| |||| |||||| | ||||
Sbjct 153941 CTGCCCTGGC-TCCTGCTCAGGAATGAATACAGGTATTTCCAAAGAATGACCACAACTTC 153883
Query 2250 TTCCACTGACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCC 2309
||| || ||||||||| | || |||||||| || ||||| ||||| || ||||
Sbjct 153882 TTCAGTAGAAGGTAAACAGAATTTGGTGATTATGGGTAGGAAGACCTGGTTCTCCATTCC 153823
Query 2310 CATTAAAAGCAGGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGA 2369
| | | ||||| | ||||||| ||| | |||||||||||| | || || ||
Sbjct 153822 AGAGACGAATCGACCTTTAGAGGACAGAATTAATATAGTTCTCAGTAGAGAACTCAAGGA 153763
Query 2370 GCCACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAAT 2429
|| |||| || ||||| ||| |||| |||||| | ||| | || | || ||||
Sbjct 153762 ACCTCCACAGGGAGCTCATTTTCTTGCCAAAAGTCTGGATGATGCCTTAAAACTTATTGA 153703
Query 2430 AGGACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTA 2489
||||||||||| | | | ||||| | | |||||||| | || || || || ||
Sbjct 153702 GCAACCAGAATTAACAAATAAAGTGGACATGGTTTGGATAGTGGGACACAGTTCAGTTTA 153643
Query 2490 TGAGGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAA 2549
|||| ||| | || | || | | | || ||| | |||||||| |||| |
Sbjct 153642 CAAGGAAGCCATGAACAGGCCAGGCCATCTGCGACTATTTGTGACAAGGATCATGCAGGA 153583
Query 2550 ATTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGA 2609
||||||| |||| |||| || ||||||| | || | ||||| |||| || | ||
Sbjct 153582 ATTTGAAAGTGACACATTTTTTCCAGAAACTGATTTGGAAAAATATAAACTTCTCCCAGA 153523
Query 2610 ATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAAT 2651
|| |||||||||||| |||| || || || || || || ||
Sbjct 153522 ATATCCAGGTGTTCCTTCTGATGTCCAGGAGGAGAAAGGCAT 153481
>seq17760
Length=37209
Score = 118 bits (130), Expect = 9e-22
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||||||| | ||||| || ||||||||| | || || || |||||||||
Sbjct 7440 GTGGTGGAGGAGCTCTTCAGGGATGGAGTGAACTGGGGGAGGATCGTGGCCTTCTTTGAG 7381
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| ||||| || ||||||||||| |||||||| | | || || |||| || ||||||
Sbjct 7380 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCCCCCCTGGTGGACAAC 7321
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||| ||||||||| ||
Sbjct 7320 ATCGCCCTGTGGATGACTGA 7301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413261641710148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |