Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 4e-13 seq12339 82.4 7e-11 >seq15 Length=680746 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || ||||| | || || || | || || ||||||||||| ||||| Sbjct 219622 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219563 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | ||||||||| | ||| | || ||||| ||| ||| || |||| | Sbjct 219562 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTGACGTT 219503 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | |||||| |||| ||||| | || || ||||| || || || Sbjct 219502 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219443 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 219442 GAAGATCTGCAT 219431 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || ||||| | || || || | || || ||||||||||| ||||| Sbjct 219850 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219791 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | ||||||||| | ||| | || ||||| ||| ||| || || | | Sbjct 219790 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 219731 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | |||||| |||| ||||| | || || ||||| || || || Sbjct 219730 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219671 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 219670 GAAGATCTGCAT 219659 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || ||||| | || || || | || || ||||||||||| ||||| Sbjct 219394 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219335 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | ||||||||| | ||| | || || || ||| ||| || || | | Sbjct 219334 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 219275 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | |||||| |||| ||||| | || || ||||| || || || Sbjct 219274 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219215 Query 39273 AAAGATTTGCATC 39285 ||||| |||||| Sbjct 219214 GAAGATCTGCATC 219202 >seq12339 Length=50223 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || ||||| | || || || | || || ||||||||||| ||||| Sbjct 7543 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 7602 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | ||||||||| | ||| | || || || ||| |||| || || | | Sbjct 7603 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC-TGATCTTGGCCTTCACGTT 7661 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | |||||| |||| ||||| | || || ||||| || || || Sbjct 7662 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 7721 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 7722 GAAGATCTGCAT 7733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428286263176541