Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq15 89.7 4e-13
seq12339 82.4 7e-11
>seq15
Length=680746
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || || || ||||| | || || || | || || ||||||||||| |||||
Sbjct 219622 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219563
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| || | ||||||||| | ||| | || ||||| ||| ||| || |||| |
Sbjct 219562 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTGACGTT 219503
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | || || || | |||||| |||| ||||| | || || ||||| || || ||
Sbjct 219502 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219443
Query 39273 AAAGATTTGCAT 39284
||||| |||||
Sbjct 219442 GAAGATCTGCAT 219431
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || || || ||||| | || || || | || || ||||||||||| |||||
Sbjct 219850 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219791
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| || | ||||||||| | ||| | || ||||| ||| ||| || || | |
Sbjct 219790 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 219731
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | || || || | |||||| |||| ||||| | || || ||||| || || ||
Sbjct 219730 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219671
Query 39273 AAAGATTTGCAT 39284
||||| |||||
Sbjct 219670 GAAGATCTGCAT 219659
Score = 82.4 bits (90), Expect = 7e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || || || ||||| | || || || | || || ||||||||||| |||||
Sbjct 219394 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 219335
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| || | ||||||||| | ||| | || || || ||| ||| || || | |
Sbjct 219334 GATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 219275
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | || || || | |||||| |||| ||||| | || || ||||| || || ||
Sbjct 219274 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 219215
Query 39273 AAAGATTTGCATC 39285
||||| ||||||
Sbjct 219214 GAAGATCTGCATC 219202
>seq12339
Length=50223
Score = 82.4 bits (90), Expect = 7e-11
Identities = 134/192 (70%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
|||||| || || || ||||| | || || || | || || ||||||||||| |||||
Sbjct 7543 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 7602
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| || | ||||||||| | ||| | || || || ||| |||| || || | |
Sbjct 7603 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC-TGATCTTGGCCTTCACGTT 7661
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | | || || || | |||||| |||| ||||| | || || ||||| || || ||
Sbjct 7662 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 7721
Query 39273 AAAGATTTGCAT 39284
||||| |||||
Sbjct 7722 GAAGATCTGCAT 7733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428286263176541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |