Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq24761 107 1e-18
seq2586 107 1e-18
seq15 98.7 7e-16
seq12339 86.0 4e-12
seq4730 82.4 5e-11
>seq24761
Length=36067
Score = 107 bits (118), Expect = 1e-18
Identities = 153/214 (71%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||||||||| || ||||| || |||| | | ||||||||||| ||||| || |||
Sbjct 10754 TGCAGATTTTCGTGAAGACCCTGACAGGAAGACC-ATCACTCTCGAGGTTGAACCCTCGG 10696
Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731
| || | |||| |||| || || ||||| ||||| | | || || || |
Sbjct 10695 ATACAATAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 10636
Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791
|| | | || ||||| ||||| ||||||||||| | ||| ||||| || |||||||
Sbjct 10635 AGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACA 10576
Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| ||||| | |||||| | ||| | || || ||
Sbjct 10575 TTCAAAAGGGGTCCACTCTTCATATTGTGTTGAG 10542
>seq2586
Length=172570
Score = 107 bits (118), Expect = 1e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||||||||| || |||| ||||| || || ||||||||||| || || || |||
Sbjct 46898 TGCAGATTTTCGTGAAGACCCAGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGG 46839
Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731
| | || |||| |||| || || ||||| ||||| | || || || || |
Sbjct 46838 ATGCAGTAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGC 46779
Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791
| | | || ||||| ||||| ||||||||||| | ||| ||||| || |||||||
Sbjct 46778 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 46719
Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| || || |||||||| | ||| | || || ||
Sbjct 46718 TTCAGAAGGAGTCCACTCTTCATCTTGTGTTGAG 46685
>seq15
Length=680746
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || |||
Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | || |||||||| | || ||||| ||
Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGA-TCCAGGATAAAGAAGGCATCCCCCCAGACCA 219777
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| |||||||| |||||||| | |||||| | ||||||||
Sbjct 219778 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219837
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||| ||
Sbjct 219838 CATCCAGAAAGAGTCGAC 219855
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || |||
Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || || |||||||| | || ||||| ||
Sbjct 219491 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219550
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| |||||||| |||||||| | |||||| | |||||||||
Sbjct 219551 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219610
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 219611 ATCCAGAAAGAGTCGAC 219627
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || |||
Sbjct 219203 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219262
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || || || ||||| | || ||||| ||
Sbjct 219263 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCAG 219322
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| |||||||| |||||||| | |||||| | |||||||||
Sbjct 219323 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219382
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 219383 ATCCAGAAAGAGTCGAC 219399
Score = 82.4 bits (90), Expect = 5e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| || ||| | || || || || ||||| || || || || |||
Sbjct 218974 AATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 219033
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || | | || || || || ||||| || | || ||||| ||
Sbjct 219034 TGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCACCAGACCA 219093
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| ||||| |||||||| | ||||| | || |||||
Sbjct 219094 GCAGAGACTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 219153
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 219154 CATCCAGAAAGAGTCCAC 219171
>seq12339
Length=50223
Score = 86.0 bits (94), Expect = 4e-12
Identities = 139/198 (70%), Gaps = 3/198 (2%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || |||
Sbjct 7733 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 7674
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || | || | || | | || || ||||| | || || || ||
Sbjct 7673 GACACCATCGAGAACGTGAAGGCCAAGATCAG--GATAAGGAAGGCATCCCCCCTGACCA 7616
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| |||||||| |||||||| | |||||| | ||||||||
Sbjct 7615 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 7556
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||| ||
Sbjct 7555 CATCCAGAAAGAGTCGAC 7538
>seq4730
Length=198489
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/218 (68%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||| || || ||||| ||||| || || |||||||||| || || ||
Sbjct 50816 AACATGCAGATTTTTGTGAAGACCCTGACGGGGAAGACCGTCACTCTCGAGGTCGAACCC 50875
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | || | |||| || || ||||| ||||| | || || ||
Sbjct 50876 TCGGATACGATAGAGAATGTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 50935
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | | | |||| || ||
Sbjct 50936 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTT----GGACCAC 50991
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|||| ||| | |||||||| | ||| | || || ||
Sbjct 50992 AACACTCAAGAGGAGTCCACTCTTCATCTTGTGTTGAG 51029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337018627362956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |