Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq24761 107 1e-18 seq2586 107 1e-18 seq15 98.7 7e-16 seq12339 86.0 4e-12 seq4730 82.4 5e-11 >seq24761 Length=36067 Score = 107 bits (118), Expect = 1e-18 Identities = 153/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 ||||||||||||| || ||||| || |||| | | ||||||||||| ||||| || ||| Sbjct 10754 TGCAGATTTTCGTGAAGACCCTGACAGGAAGACC-ATCACTCTCGAGGTTGAACCCTCGG 10696 Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 | || | |||| |||| || || ||||| ||||| | | || || || | Sbjct 10695 ATACAATAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 10636 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||||||| Sbjct 10635 AGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACA 10576 Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 | ||||| | |||||| | ||| | || || || Sbjct 10575 TTCAAAAGGGGTCCACTCTTCATATTGTGTTGAG 10542 >seq2586 Length=172570 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 ||||||||||||| || |||| ||||| || || ||||||||||| || || || ||| Sbjct 46898 TGCAGATTTTCGTGAAGACCCAGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGG 46839 Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 | | || |||| |||| || || ||||| ||||| | || || || || | Sbjct 46838 ATGCAGTAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGC 46779 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 | | | || ||||| ||||| ||||||||||| | ||| ||||| || ||||||| Sbjct 46778 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 46719 Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 | || || |||||||| | ||| | || || || Sbjct 46718 TTCAGAAGGAGTCCACTCTTCATCTTGTGTTGAG 46685 >seq15 Length=680746 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || || || || ||| Sbjct 219659 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219718 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | || |||||||| | || ||||| || Sbjct 219719 GACACCATCGAGAATGTGAAGGCCAAGA-TCCAGGATAAAGAAGGCATCCCCCCAGACCA 219777 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| |||||||| |||||||| | |||||| | |||||||| Sbjct 219778 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 219837 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 219838 CATCCAGAAAGAGTCGAC 219855 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || || || || ||| Sbjct 219431 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219490 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || |||||||| | || ||||| || Sbjct 219491 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCAGACCAG 219550 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| |||||||| |||||||| | |||||| | ||||||||| Sbjct 219551 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219610 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 219611 ATCCAGAAAGAGTCGAC 219627 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || || || || ||| Sbjct 219203 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 219262 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || || ||||| | || ||||| || Sbjct 219263 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCAG 219322 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| |||||||| |||||||| | |||||| | ||||||||| Sbjct 219323 CAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAAC 219382 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 219383 ATCCAGAAAGAGTCGAC 219399 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||| | || || || || ||||| || || || || ||| Sbjct 218974 AATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 219033 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || || ||||| || | || ||||| || Sbjct 219034 TGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCACCAGACCA 219093 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| ||||| |||||||| | ||||| | || ||||| Sbjct 219094 GCAGAGACTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 219153 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 219154 CATCCAGAAAGAGTCCAC 219171 >seq12339 Length=50223 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/198 (70%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || || || || ||| Sbjct 7733 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 7674 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || | || | | || || ||||| | || || || || Sbjct 7673 GACACCATCGAGAACGTGAAGGCCAAGATCAG--GATAAGGAAGGCATCCCCCCTGACCA 7616 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| |||||||| |||||||| | |||||| | |||||||| Sbjct 7615 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 7556 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 7555 CATCCAGAAAGAGTCGAC 7538 >seq4730 Length=198489 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || || ||||| ||||| || || |||||||||| || || || Sbjct 50816 AACATGCAGATTTTTGTGAAGACCCTGACGGGGAAGACCGTCACTCTCGAGGTCGAACCC 50875 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | || | |||| || || ||||| ||||| | || || || Sbjct 50876 TCGGATACGATAGAGAATGTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 50935 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | | | |||| || || Sbjct 50936 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTT----GGACCAC 50991 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 |||| ||| | |||||||| | ||| | || || || Sbjct 50992 AACACTCAAGAGGAGTCCACTCTTCATCTTGTGTTGAG 51029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337018627362956