Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4260 176 4e-39 seq4304 156 3e-33 seq3042 93.3 3e-14 >seq4260 Length=133197 Score = 176 bits (194), Expect = 4e-39 Identities = 138/165 (84%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| ||||| || | |||||||||||||||||||||| Sbjct 112047 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGC 111988 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || |||||||| |||||||||||||| |||||||| || ||||| |||| | Sbjct 111987 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 111928 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 ||||| ||||| || | |||||||||||| || |||||||||||| Sbjct 111927 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATGAGA 111883 >seq4304 Length=228172 Score = 156 bits (172), Expect = 3e-33 Identities = 260/371 (70%), Gaps = 11/371 (3%) Strand=Plus/Minus Query 29610 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGT 29669 ||||||||| || | || | || ||||| || ||||| | || | ||| ||||||| Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885 Query 29670 AGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729 | | || |||||||||| ||||| ||| | || || || | || || |||| ||| | Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825 Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789 | |||||||| ||||| || | |||||||||||||| |||| ||| | || ||| ||| Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765 Query 29790 CCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 29849 | |||||| ||||||| |||| ||| || || || || ||||||| || || || | Sbjct 2764 CTCCTGACTTCTGGTACAGCT-GCAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAA 2707 Query 29850 TGGCATGGCACGGAGGAA-------GGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCA 29902 |||||||||| | || | ||| |||||| | ||||| | ||||| ||| Sbjct 2706 GGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTT-CGATTCCAAGCA 2648 Query 29903 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 29962 | | ||||| | |||||||| ||||| | |||| ||| | | |||||||| Sbjct 2647 CGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGT 2588 Query 29963 TGATCCACCCC 29973 || || || || Sbjct 2587 TGGTCTACTCC 2577 >seq3042 Length=197541 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || || ||||| |||| || | ||||| || Sbjct 153744 ATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTC-CT 153802 Query 114322 C-AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 114380 | | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| | Sbjct 153803 CTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 153862 Query 114381 TCTGCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413 |||| |||||| | ||||| || | ||||| Sbjct 153863 TCTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 153895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404972415426502