Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq4260 176 4e-39
seq4304 156 3e-33
seq3042 93.3 3e-14
>seq4260
Length=133197
Score = 176 bits (194), Expect = 4e-39
Identities = 138/165 (84%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||||||||||
Sbjct 112047 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGC 111988
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || |||||||| |||||||||||||| |||||||| || ||||| |||| |
Sbjct 111987 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 111928
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
||||| ||||| || | |||||||||||| || ||||||||||||
Sbjct 111927 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATGAGA 111883
>seq4304
Length=228172
Score = 156 bits (172), Expect = 3e-33
Identities = 260/371 (70%), Gaps = 11/371 (3%)
Strand=Plus/Minus
Query 29610 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGT 29669
||||||||| || | || | || ||||| || ||||| | || | ||| |||||||
Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885
Query 29670 AGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729
| | || |||||||||| ||||| ||| | || || || | || || |||| ||| |
Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825
Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789
| |||||||| ||||| || | |||||||||||||| |||| ||| | || ||| |||
Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765
Query 29790 CCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 29849
| |||||| ||||||| |||| ||| || || || || ||||||| || || || |
Sbjct 2764 CTCCTGACTTCTGGTACAGCT-GCAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAA 2707
Query 29850 TGGCATGGCACGGAGGAA-------GGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCA 29902
|||||||||| | || | ||| |||||| | ||||| | ||||| |||
Sbjct 2706 GGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTT-CGATTCCAAGCA 2648
Query 29903 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 29962
| | ||||| | |||||||| ||||| | |||| ||| | | ||||||||
Sbjct 2647 CGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGT 2588
Query 29963 TGATCCACCCC 29973
|| || || ||
Sbjct 2587 TGGTCTACTCC 2577
>seq3042
Length=197541
Score = 93.3 bits (102), Expect = 3e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321
||||||||| || || || || || || || ||||| |||| || | ||||| ||
Sbjct 153744 ATGAGCTCCCTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTATATTAATTCTGTC-CT 153802
Query 114322 C-AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 114380
| | ||||| |||| | || || ||||||||||| ||||| |||||||| ||||||| |
Sbjct 153803 CTAAAGGTCGATTCGTCTCTGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAAAT 153862
Query 114381 TCTGCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413
|||| |||||| | ||||| || | |||||
Sbjct 153863 TCTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 153895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404972415426502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |