Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1971 217 1e-51 seq2230 129 5e-25 seq16446 123 2e-23 seq2823 111 1e-19 seq873 109 5e-19 seq4569 98.7 8e-16 >seq1971 Length=167910 Score = 217 bits (240), Expect = 1e-51 Identities = 453/670 (68%), Gaps = 10/670 (1%) Strand=Plus/Minus Query 4467 TGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTT 4526 |||||||| | || || | ||| |||||||| | | | | | || ||||| | | Sbjct 91612 TGTTCTATCCTAACTGCATTGACGATGATATCTTTAACTCTCTGCTCCGAAGGTTTGTGT 91553 Query 4527 ACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATC 4586 | | || | |||| | || ||||| ||||| || ||||| |||||||||||||| Sbjct 91552 AGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATA 91493 Query 4587 AGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCG 4646 ||||| || ||||| || | |||| ||| | |||| || || ||||| ||||||| Sbjct 91492 AGTTCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGAT 91433 Query 4647 GCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCG 4706 ||||| || ||||||||||| || ||||| | ||| |||| ||||| | | ||| Sbjct 91432 GCAAAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGTTCTCCG 91373 Query 4707 AACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCA 4765 ||| ||| ||||||||| |||| || ||||| | || ||||| || || Sbjct 91372 TACGTAGC-CTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACA 91314 Query 4766 CGGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTTTCAAATGG-GTCTTGAATAT 4821 || | ||| | | || || || |||| |||| || ||| |||| ||| | Sbjct 91313 AGGCACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTT----TGGAATCTTTAATGT 91258 Query 4822 AAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATC 4881 ||||||| || || || || | ||||||| ||||||| ||||| | ||||| || || | Sbjct 91257 AAGTGTCAATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGC 91198 Query 4882 CGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTT 4941 | || || | | ||||| || | |||||||| | | || | || || |||||| Sbjct 91197 CATAGAAATAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTT 91138 Query 4942 CGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTT 5001 | |||||||| | ||||| |||||| | || |||| |||| || | || | | Sbjct 91137 CATTTACTATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCT 91078 Query 5002 CGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAG 5061 | |||||||| || || |||||| | | || || | | || || || ||| | | Sbjct 91077 CCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTG 91018 Query 5062 TCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121 |||| || || | |||||||| || ||||| ||||| |||| |||| | | |||| Sbjct 91017 TCCAGAAGGAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAA 90958 Query 5122 GTATGACAAA 5131 |||||||| Sbjct 90957 AGATGACAAA 90948 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 |||||||||||||| ||||| || ||||| || | |||||||| | |||| ||||| Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481 Query 4692 AC 4693 || Sbjct 88480 AC 88479 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||| |||||||| || || || |||||||||||||||||||| ||||| || ||| Sbjct 86613 TCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 86554 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 || || || || || || || | ||||| || | |||||||| Sbjct 86553 ATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTC 86510 >seq2230 Length=225668 Score = 129 bits (142), Expect = 5e-25 Identities = 289/427 (68%), Gaps = 9/427 (2%) Strand=Plus/Minus Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330 ||||| ||| | ||||| ||||| || ||||| ||||||| |||||||| ||||| Sbjct 225365 TACTCTCTTCCCAAAGAAGTTAGTCTTCCCTTCCGT-GAAATATCCTCCATAAAGTCAAA 225307 Query 4331 CGGATTAGTTGCGTTGTAATGTTTT-TCACACTTTAGAGCTACA--AGCAATCGGTCAGC 4387 ||||| | | || || || | | || | || || | | || ||| || Sbjct 225306 TGGATTTTCTACTCTGAAAACCTTGCTAAAACCC---ACCTCCAGCATAAGTCTGTCTGC 225250 Query 4388 TACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAG 4447 || ||||| | ||||| |||| | |||| || || || || | ||| | || Sbjct 225249 CACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTCCACTGTCAG 225190 Query 4448 CGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGT-GATTATATCTTTTATTT 4506 || | ||| | ||||| |||||||| | | || ||| |||||| ||||| | | Sbjct 225189 GGCTTCTGTGAGGAACTCGTGTTCTATCCTAGCTGCA-CTGACGATTATTTCTTTGACTC 225131 Query 4507 TATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCA 4566 | | | || |||| | || | || | |||| | || ||||| ||||| || | Sbjct 225130 TCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTA 225071 Query 4567 AACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626 |||| |||||||||||||| || || || ||||| || | |||| ||| | |||| | Sbjct 225070 AACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTT 225011 Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686 | || ||||| ||||||| ||||| |||||||||||||| || ||||| | ||| ||| Sbjct 225010 TCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGCTGCGACAA 224951 Query 4687 ACGCTAC 4693 | ||||| Sbjct 224950 AGGCTAC 224944 >seq16446 Length=51252 Score = 123 bits (136), Expect = 2e-23 Identities = 274/407 (67%), Gaps = 7/407 (2%) Strand=Plus/Plus Query 31667 CTATCTGAACATGCTACGGTTCCTACAAAAGGATCAGAGGGTTCTGCGGGATATGATTTA 31726 || || || || || || | ||| || || || || ||| | | ||||| ||||| || Sbjct 36947 CTTTCGGAGCACGCCACCGCTCCGACCAAGGGGTCTGAGCGCGCCGCGGGCTATGACGTA 37006 Query 31727 TATAGCGCCTACGACTATGTGGTAGAGGCAAAATCTAGAGCGCTAGTTAAAACCGATATT 31786 || | ||||| || || ||| | | | ||| || || ||||| || ||| Sbjct 37007 TACGGTGCCTATGATTACACAGTACCATCTATGGAGAAAGCCCTTGTGAAAACAGACATT 37066 Query 31787 CAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTT 31846 || || || | ||||| |||||||| || || ||||||| | ||||| ||||| | Sbjct 37067 CAGATAGCTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCA 37126 Query 31847 AAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGA 31906 |||||||| || || || || || ||||| |||||| ||| |||||||||| |||| Sbjct 37127 AAACACTTCATAGATGTAGGAGCTGGTGTCATAGATGAAGATCATAGAGGAAATGTTGTT 37186 Query 31907 ATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAGGGCGATAGGGTA 31963 |||| ||||||||||||| |||||| | | || | |||||||| ||| | Sbjct 37187 GTTGTACTGTTTAATTTTGGCAAAGAAAAGTTCGA-AG--TCAAAAAGGGTGATCAAATT 37243 Query 31964 GCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCTAATTATCTAGAT 32023 || || || ||||| ||| ||| || ||||||| | || | | | ||||| Sbjct 37244 GCACAGCTCATTTGTGAACGGATATTTTACCCAGAAATAGAGGAAGTTCAAGTTTTAGAT 37303 Query 32024 TGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAATTAATT 32070 ||| |||| || | ||| ||||| || || ||||| ||||| Sbjct 37304 GACACTGAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAA-TAATT 37349 >seq2823 Length=208084 Score = 111 bits (122), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCT 31834 || ||| | ||||| || || | ||||| |||| ||| || || ||||| | | ||| Sbjct 169680 AAGACCAACATTCAGATAGCTCTTCCTTCTGGGTACTATGGGAGAGTAGCTGCACGTTCT 169621 Query 31835 GGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGA 31894 || ||||| | |||||||| || || || || || |||| |||||| ||| |||||| Sbjct 169620 GGCTTGGCTGCAAAACACTTCATAGATGTAGGAGCCAGTGTCATAGATGAAGATTATAGA 169561 Query 31895 GGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAG 31951 ||||| ||||| ||||| ||||||||||||| |||||| | | || | |||||| Sbjct 169560 GGAAATGTTGGTATTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTGAAG--TCAAAAAG 169504 Query 31952 GGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATA 31987 | ||| | | || || || ||||| ||| | ||| Sbjct 169503 TGTGATCGAATTGCACATCTCATTTGTGAACACATA 169468 >seq873 Length=256982 Score = 109 bits (120), Expect = 5e-19 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 31667 CTATCTGAACATGCTACGGTTCCTACAAAAGGATCAGAGGGTTCTGCGGGATATGATTTA 31726 || || || || || || | ||| || || || || ||| | | ||||| ||||| || Sbjct 219977 CTTTCGGAGCACGCCACCGCTCCGACCAAGGGGTCCGAGCGCGCCGCGGGCTATGACCTA 219918 Query 31727 TATAGCGCCTACGACTATGTGGTAGAGGCAAAATCTAGAGCGCTAGTTAAAACCGATATT 31786 || || |||| || || ||| | | | ||| || | ||||| || ||| Sbjct 219917 TACAGTGCCTGTGAATACACAGTACCACCTACGGAGAAAGCTCTTGCGAAAACAGACATT 219858 Query 31787 CAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTT 31846 || || || | ||| |||||||| || || ||||||| | ||||| ||||| | Sbjct 219857 CAGATAGCTCTTCCTAATGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCA 219798 Query 31847 AAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGA 31906 |||||||| || || || || || ||||| |||||| ||| ||||||||||| ||||| Sbjct 219797 AAACACTTCATAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGT 219738 Query 31907 ATTGTGTTGTTTAATTTT 31924 |||| ||||||||||| Sbjct 219737 GTTGTACTGTTTAATTTT 219720 >seq4569 Length=138791 Score = 98.7 bits (108), Expect = 8e-16 Identities = 100/130 (77%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| || || || |||||||||||||||||||| || || | Sbjct 26741 AAAATCTT---ACCAAATTTTCATTCACAATTCCGTCACTGGCTGCAAAAAAGGCTAAGA 26685 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| ||||| |||| || || | ||||| || |||||||| || | ||| || | Sbjct 26684 TGTGAGAGATAAAATACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 26625 Query 5041 TTAAATCAAC 5050 ||||||||| Sbjct 26624 ATAAATCAAC 26615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425797580920481