Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4260 143 2e-29 seq4304 129 4e-25 >seq4260 Length=133197 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || | ||||||||||||||||||||| Sbjct 112047 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTAAAGGGC 111988 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| || ||||||||||| ||||| || || ||||| || | Sbjct 111987 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 111928 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | ||| |||||||| || || |||||||| Sbjct 111927 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATGAG 111884 Score = 82.4 bits (90), Expect = 6e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| || || || ||||||||||| || || || || || || || | || Sbjct 108828 CATCTCTTTGTATTCGGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATC 108769 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || ||| | ||| ||| ||| ||||||| ||||||| ||| || || || || Sbjct 108768 CCCTTCTGCTCTGGTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTAGCATC 108709 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| || || ||||| || ||||| || | ||||||||| || Sbjct 108708 CCAGATTTTCACTCCCTTGGAAGACAGCTCCTTAGCGTTTGTGGATCC 108661 >seq4304 Length=228172 Score = 129 bits (142), Expect = 4e-25 Identities = 350/529 (66%), Gaps = 20/529 (4%) Strand=Plus/Minus Query 27104 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 27163 ||||||||| || | || | || ||||| | |||||| | || | |||||| |||| Sbjct 2943 TGGGAAAGGC-CTTGATTCTCCCTGAAGCTGCATTTTCAGCAGCTCAATGTGATCAAGGT 2885 Query 27164 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223 | | || || ||||||| ||||| ||| | || || || | || || |||| ||| | Sbjct 2884 AAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTG 2825 Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283 | |||||||| ||||| || | |||||||||||||| |||| || | || ||| ||| Sbjct 2824 CGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCTGT 2765 Query 27284 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC----TCCATCGCTTACGTAAAACTGA 27339 | || ||| ||||||| ||||| || || || || | |||| ||||| || || Sbjct 2764 CTCCTGACTTCTGGTACAGCTG-CAGGACAG-TCATGGTTCATC----ACGTAGAAGTGG 2711 Query 27340 CATATGGCGTGGCACGGAGGAA-------GAGCCATGAGGCCCAAGTCTTTGGGGTTCCA 27392 || | ||| |||||| | || | | | ||||| | ||||| | ||||| Sbjct 2710 CAAAGGGCATGGCACAGGGGCAGGGTGGTGGGGTATGAGAGGAAGATCTTT-CGATTCCA 2652 Query 27393 GGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 27452 || | | ||||| | |||||||| ||||| | |||| ||| | | ||||| Sbjct 2651 AGCACGTAGAATGATTCTTCTGTCTTCAAGGTTGGTTTTGATTGTGTCAATCACCTTTTG 2592 Query 27453 CAGCTGATCCACCCCCATCCCCGAGT-AGTCTACCCTCATGTCCGTGTACTCTGCTCCGA 27511 ||| || || || || || || | | | || || || |||| || || | | Sbjct 2591 CAGTTGGTCTACTCCTTGACCTGAATAAATTTAAATCCACATCTTTGTATTCGGCCACCA 2532 Query 27512 AATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 27571 || ||||||| || || | || || | || | | || ||||| ||| || Sbjct 2531 AAAGCCTCCACTGAAAGCTATAAACTAGGCCTAAATTCCCTTCTTCTCTGGTGGAGAGTA 2472 Query 27572 CCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620 || ||||||| ||||||| ||| |||| ||| |||||||| || || Sbjct 2471 CCAGGCTGTCCAAGAAGTCTCGGGACCCGTAGGCATCCCAGATTTTCAC 2423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368423883063467