Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1971 266 4e-66 seq2230 217 2e-51 seq3161 129 8e-25 seq16446 120 4e-22 seq2823 95.1 2e-14 >seq1971 Length=167910 Score = 266 bits (294), Expect = 4e-66 Identities = 421/601 (70%), Gaps = 7/601 (1%) Strand=Plus/Minus Query 48126 TGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCG 48185 ||||| ||||| | || ||||| ||||| || | ||| || ||||| ||||| | ||| Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487 Query 48186 TTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAA 48245 || ||||||||||| |||| ||| ||||| ||||| |||||||| ||||| | || ||| Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427 Query 48246 GATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTC--TCTCTCCGTAAC 48303 || ||||||||||| || ||||| | || |||| || || | | |||||||| Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGC--TACGACAGGTTCTCCGTACG 91369 Query 48304 TGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA 48360 | || || |||| | |||| || |||||||| ||| ||||||||||||||||| Sbjct 91368 TAGCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGCA 91309 Query 48361 TTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTA 48420 ||| || | ||||| ||||| || | |||| ||| |||||||| |||||| || | Sbjct 91308 CTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAA 91249 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | | ||||| | |||||| | || || ||||| | || || || || || || ||| Sbjct 91248 TGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAAT 91189 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 | | ||||| || ||||| || || | || || || || | || |||||||||| Sbjct 91188 AACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACTA 91129 Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600 | | |||||| || ||| | || || | ||| | | ||| || | || | | Sbjct 91128 TGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAGGCT 91069 Query 48601 TCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATG 48660 |||| | ||||| | || || || || | || || || ||||||||||| || | Sbjct 91068 TCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGG 91009 Query 48661 ATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAA 48720 | | ||| ||||| |||||||| | ||| | ||||| |||| || || || || |||| Sbjct 91008 AAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGACAA 90949 Query 48721 A 48721 | Sbjct 90948 A 90948 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 || ||||| ||||| | ||| || ||||||||||| |||||||| ||||| ||||||||| Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| || Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGC 88482 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 47851 ||| |||||| |||| || | ||| ||| ||| || ||||| |||||||| | Sbjct 92042 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGGACATCACTCCCATCCT 91983 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| || || || | ||||| || || ||||| || ||||||| ||| ||||| || Sbjct 91982 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 91923 Query 47912 CATAAAATCAAATGGATT 47929 |||||| ||||||||||| Sbjct 91922 CATAAAGTCAAATGGATT 91905 >seq2230 Length=225668 Score = 217 bits (240), Expect = 2e-51 Identities = 454/668 (68%), Gaps = 14/668 (2%) Strand=Plus/Minus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 47851 ||| |||||| |||| || | ||| ||| ||| || ||| | |||||||| | Sbjct 225437 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGGACGTCACTCCCATCCT 225378 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| | || || | ||| | || || ||||| || |||||| ||| |||| || Sbjct 225377 CTGATACTTGCCTACTCTCTTCCCAAAGAAGTTAGTCTTCCCTTCCG-TGAAATATCCTC 225319 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| ||||||||||| || | | ||| || |||| || | || || || Sbjct 225318 CATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCACCTCCAGCATAAG 225259 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 ||| ||||| |||||||| | || ||||||| | |||||||| || || || | Sbjct 225258 TCTGTCTGCCACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTC 225199 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGA 48091 |||| || || || || || ||||| ||||| || | | ||| || ||||| Sbjct 225198 CACTGTCAGGGCTTCTGTGAGGAACTCGTGTTCTATCCTAGCTGCACTGACGATTATTTC 225139 Query 48092 TGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATC 48151 | | || | | ||| || | | || ||||| ||||| | || ||||| || Sbjct 225138 TTTGACTCTCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTC 225079 Query 48152 ACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAG 48211 ||| || | ||| || ||||| ||||| | || || ||||||||||| |||| ||| || Sbjct 225078 ACAGTGTAAACCCTCGTCTCTGCTAATAAGATCATTGGAAAATGTGAGGCCGGCCATCAG 225019 Query 48212 TCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 48271 ||| ||||| |||||||| ||||| | || ||||| ||||||||||| || ||||| | Sbjct 225018 TCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCGC 224959 Query 48272 GGCCGCAAATGCGGTAAGTC--TCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGT 48326 || |||| || || | | |||||||| | || || |||| | |||| || Sbjct 224958 TGCGACAAAGGC--TACGACAGGTTCTCCGTACGTAGCCTCTTTGTCTTCGATCCGGCGC 224901 Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386 | |||||| ||| |||||||||||| |||| ||| || | |||| | ||| || Sbjct 224900 AAGGTCCAATCTGCCGCCTTCTTTACACAGGGCACTGTCTCACTGACATTGATGAG-GAG 224842 Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 | |||| ||| |||||||| ||| | || | | | ||||| | |||||| | || Sbjct 224841 TCCCTTTCTTTGGAATCTTTAATGTAGTTGTC-AATGAGAGACTGTCCATTTCACA-TGT 224784 Query 48447 ATATTTTC 48454 || ||||| Sbjct 224783 ATGTTTTC 224776 >seq3161 Length=206284 Score = 129 bits (142), Expect = 8e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| ||||| || || |||||| ||| |||| || || ||||| || | Sbjct 168777 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 168718 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| |||||||| |||||||||||||| ||||| ||||| || | ||||| | Sbjct 168717 TCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 168658 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | |||| |||||||| | ||| || ||| ||| || | || || |||| Sbjct 168657 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCCTCAGGAA 168607 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || || ||||||||||| ||||| | || Sbjct 166545 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATAAGGTTCAATTGAC 166486 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| |||||||| || |||||||| |||||||| ||||| || || | | |||||| Sbjct 166485 TCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAACTG 166426 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 166425 TTTCTTATACCAT 166413 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| || ||||| || || ||| Sbjct 147951 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAGAGAAGGTTG 147892 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || ||||| || || | ||| | ||||||| Sbjct 147891 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATGCCCACAGATACCCTCATCAAC 147832 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| ||||||||| || Sbjct 147831 ATATGCTGTGGTCTTTCAGCC 147811 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || || || | || | ||| Sbjct 156252 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 156193 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| || ||||| | || || ||||||| || Sbjct 156192 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 156133 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | | |||||||| Sbjct 156132 TCCAGGTAAATAGCAAATGCCCCAGGTCG 156104 >seq16446 Length=51252 Score = 120 bits (132), Expect = 4e-22 Identities = 248/362 (69%), Gaps = 19/362 (5%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 ||||||||| ||||| ||| ||| | | |||||||| |||||| | ||| |||||| Sbjct 37342 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATCTAAAACTTGAACTTCC 37285 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || || ||| |||| |||| | | || || || || ||| ||||||| | || Sbjct 37284 TCTATTTCTGGGTAAAATATCCGTTCACAAATGAGCTGTGCAATTTGATCACCCTTTTTG 37225 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | ||| || | ||||| ||| ||| | ||| | || ||| | ||||||| |||| Sbjct 37224 ACTTCGAACTTTTCTTTGCCAAAATTAAACAGTACAACAACAACATTTCCTCTATGATCT 37165 Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || |||| ||||| || |||| || || ||||| | ||| Sbjct 37164 TCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGGA 37105 Query 46111 GCTATTCTTCCATA----ACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAA 46166 |||| ||| ||||| ||||| || | || ||| |||| |||||||| | ||| Sbjct 37104 GCTACTCTCCCATAGCACCCAGAA----GGAAGAGCTATCTGAATGTCTGTTTTCA-CAA 37050 Query 46167 TCTCCTTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCT 46224 |||||||| || || | || || || || |||| ||||| ||||| || || Sbjct 37049 -GGGCTTTCTCCATAGATGGTACTGTGTAATCATAGGCACCGTATACGTCATAGCCCGCG 36991 Query 46225 GC 46226 || Sbjct 36990 GC 36989 >seq2823 Length=208084 Score = 95.1 bits (104), Expect = 2e-14 Identities = 175/254 (69%), Gaps = 7/254 (3%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 ||||||||| |||| ||| ||| | | |||||||| || ||| | ||| |||||| Sbjct 169393 TCCAGTGGAAGCAAAACCTCCTGAAC--CCCTTTCAGTGTCACCTAAAACTTGAACTTCC 169450 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || || ||| |||| ||| | | || || || || |||| ||||| | | || Sbjct 169451 TCTATTTCTGGGTAAAATATGTGTTCACAAATGAGATGTGCAATTCGATCACACTTTTTG 169510 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | |||||| | ||||| ||| ||| | ||| | | |||| | |||||||||||| Sbjct 169511 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAATACCAACATTTCCTCTATAATCT 169570 Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || | |||| ||||| || |||| || || ||||| | | | Sbjct 169571 TCATCTATGACACTGGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGCA 169630 Query 46111 GCTATTCTTCCATA 46124 |||| ||| ||||| Sbjct 169631 GCTACTCTCCCATA 169644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692579956968480