Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1971 260 2e-64 seq2230 179 5e-40 seq3161 132 7e-26 seq4569 107 3e-18 seq16446 87.8 3e-12 >seq1971 Length=167910 Score = 260 bits (288), Expect = 2e-64 Identities = 420/602 (70%), Gaps = 9/602 (1%) Strand=Plus/Minus Query 46615 TGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCG 46674 ||||| ||||| | || ||||| ||||| || | || || ||||| ||||| | ||| Sbjct 91546 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCA 91487 Query 46675 TTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAA 46734 || ||||||||||| || | ||| ||||| || || |||||||| ||||||| || ||| Sbjct 91486 TTGGAAAATGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAA 91427 Query 46735 GATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA---TGCGACAAGTCTCTCTCCGTAA 46791 || ||||||||||| || ||||| | || | || | ||||| || |||||||| Sbjct 91426 GAACCAGAAAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGT---TCTCCGTAC 91370 Query 46792 CTGGCATCATT---ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 | || || || | |||| | |||||||| ||| ||||||||||||||| Sbjct 91369 GTAGCCTCTTTGTCTTCGATCCGGCGCAAGGCCCAATCTGCCGCCTTCTTTACACAAGGC 91310 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 | ||| || | ||||| ||||| || | |||| | |||||||| || || || Sbjct 91309 ACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCA 91250 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | ||||| | |||||| |||| |||||||| | || || || || || || ||| Sbjct 91249 ATGAGGAGACTGTCCATTTCACAATGTATGTTTTCCACGGCAATTTGGAAGCCATAGAAA 91190 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 | | ||||| |||||||| || ||| | || || || | | || ||||| ||| Sbjct 91189 TAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCCAGTTTTCATTTACT 91130 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 || | |||||| || ||| | || |||| ||| | | ||| || | || || | Sbjct 91129 ATGCTATCACTTGCTGCAGAGAAAGCCAGAACACACGAAGTGAAACATCTCTCCTCAGGC 91070 Query 47089 GTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAAT 47148 |||| | ||||| | || || || || | || || || |||||||||||||| Sbjct 91069 TTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAG 91010 Query 47149 GACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACA 47208 || | ||| ||||| |||||||| | ||| | ||||||||||| || ||||| || ||| Sbjct 91009 GAAGACTCCGCTTTCTTATACATCTGCCAAACATCACGATATTCGACAGGAAAGATGACA 90950 Query 47209 AA 47210 || Sbjct 90949 AA 90948 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 || ||||| ||||| | ||| || ||||||||||| || ||||| ||||| || |||||| Sbjct 88600 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 88541 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || ||||| || || || || || Sbjct 88540 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 88481 Query 46774 AC 46775 || Sbjct 88480 AC 88479 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||||||| || || || || | |||||||||||||| ||||| |||||||| || || Sbjct 86614 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 86555 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995 || || || || || ||||| | ||||| |||||||| || ||| Sbjct 86554 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 86509 >seq2230 Length=225668 Score = 179 bits (198), Expect = 5e-40 Identities = 422/627 (67%), Gaps = 15/627 (2%) Strand=Plus/Minus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 ||| | |||||||| | || || | ||||| | ||| | || || ||||| || ||| Sbjct 225394 GACGTCACTCCCATCCTCTGATACTTGCCTACTCTCTTCCCAAAGAAGTTAGTCTTCCCT 225335 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443 ||| ||| |||| |||||||| ||||| ||||| || | ||| || |||| Sbjct 225334 TCCG-TGAAATATCCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAA 225276 Query 46444 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAA 46503 || | || || ||||| ||||| |||||||| | ||| ||||||| | ||| Sbjct 225275 CCCACCTCCAGCATAAGTCTGTCTGCCACGAATTCGACGTACTGCTTCATCAAAGCGCAA 225216 Query 46504 TTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACA 46563 ||||| || ||||| | || | || || || || || ||||| ||||| || | | Sbjct 225215 TTCATCCCGATGAGCTCCACTGTCAGGGCTTCTGTGAGGAACTCGTGTTCTATCCTAGCT 225156 Query 46564 GCATCCGAT-ATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAA 46622 ||| | || ||||| | | ||| | | ||| || || | || ||||| || Sbjct 225155 GCA-CTGACGATTATTTCTTTGACTCTCTGCTCCGAATGTTTGTGTAGCAGGTGTTTGAA 225097 Query 46623 CATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAA 46682 ||| | || ||||| ||||| || | || || ||||| ||||| | || || ||||| Sbjct 225096 CATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGATCATTGGAAAA 225037 Query 46683 TGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGA 46742 |||||| || | ||| ||||| || || |||||||| ||||||| || ||||| ||||| Sbjct 225036 TGTGAGGCCGGCCATCAGTCCTCGTTTCTTGAGCCACAATATAGATGCAAAAGACCCAGA 224977 Query 46743 AAAGAATATGCCTTCTACAGCCGCGAA---TGCGACAAGTCTCTCTCCGTAACTGGCATC 46799 |||||| || ||||| | || | || | ||||| || |||||||| | || || Sbjct 224976 AAAGAAGATTCCTTCCGCTGCGACAAAGGCTACGACAGGT---TCTCCGTACGTAGCCTC 224920 Query 46800 ATT---ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTC 46856 || | |||| | | |||||| ||| ||||||||||| |||| ||| || Sbjct 224919 TTTGTCTTCGATCCGGCGCAAGGTCCAATCTGCCGCCTTCTTTACACAGGGCACTGTCTC 224860 Query 46857 TATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAG 46916 | |||| | ||| ||| |||| | |||||||| || | || | | | || Sbjct 224859 ACTGACATTGATGAG-GAGTCCCTTTCTTTGGAATCTTTAATGTAGTTGTC-AATGAGAG 224802 Query 46917 ACTATACATTTCTGAATGAATGTTTTC 46943 ||| | |||||| ||| |||||||| Sbjct 224801 ACTGTCCATTTC-ACATGTATGTTTTC 224776 >seq3161 Length=206284 Score = 132 bits (146), Expect = 7e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| ||||| || || ||||||||||| ||||| | || Sbjct 166545 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTACTGGTATAAGGTTCAATTGAC 166486 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| |||||||| || ||||||||||||||||| ||||| || || | | |||||| Sbjct 166485 TCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAACTG 166426 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 166425 TTTCTTATACCAT 166413 Score = 123 bits (136), Expect = 4e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||| ||||| || || |||||| ||| | || || || ||||| || | Sbjct 168777 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGT 168718 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| ||||| |||||||| |||||||||||||| ||||| ||||| || | ||||| | Sbjct 168717 TCAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 168658 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | |||| |||||||| | ||| || ||| ||| || | || || |||| Sbjct 168657 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCCTCAGGAA 168607 Score = 120 bits (132), Expect = 4e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || |||| ||| |||||||| ||||| | || || ||||| || || || || || || Sbjct 143136 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTTGCTGCCAGGATG 143077 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 143076 GCATAGTCAGGGTGCTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 143017 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | |||||| || || | |||| ||||| || |||||||||| Sbjct 143016 TCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 142971 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| ||||| || ||||| || ||||| || || ||| Sbjct 147951 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAGAGAAGGTTG 147892 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || || ||||| || ||||| || |||| || | ||||||| Sbjct 147891 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATGCCCACAGATACCCTCATCAAC 147832 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| |||| ||| Sbjct 147831 ATATGCTGTGGTCTTTC 147815 >seq4569 Length=138791 Score = 107 bits (118), Expect = 3e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| || || |||||||| ||||| | || | Sbjct 31093 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 31034 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || | Sbjct 31033 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 30974 Query 46772 CGAC 46775 | || Sbjct 30973 CCAC 30970 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| || ||| | Sbjct 23101 TACCTCTTCTGCTGTCCAGAAGGAGGCCTGTGCCTGTTTATACATTTTCCAAATGTCAGG 23042 Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212 || ||||| ||||| || ||||||| Sbjct 23041 GTACTGGATTGGAAAGATGACAAATC 23016 >seq16446 Length=51252 Score = 87.8 bits (96), Expect = 3e-12 Identities = 215/321 (67%), Gaps = 15/321 (5%) Strand=Plus/Minus Query 44402 ATCTAGAGATTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGC 44461 ||||| | ||| |||||||||| || || ||| |||| |||| | | || || || || Sbjct 37303 ATCTAAAACTTGAACTTCCTCTATTTCTGGGTAAAATATCCGTTCACAAATGAGCTGTGC 37244 Query 44462 TATTCTATCACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCC 44521 ||| |||||| | || | || || | ||||| ||| ||| | || | || | Sbjct 37243 AATTTGATCACCCTTTTTGACTTCGAACTTTTCTTTGCCAAAATTAAACAGTACAACAAC 37184 Query 44522 AATGTTCCCCCTATAATCTTCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAG 44578 || || || |||| |||||||||||| || ||| |||| ||||| || |||| Sbjct 37183 AACATTTCCTCTATGATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGC 37124 Query 44579 AGAAAGACCCGATCTAGGCGCTATTCTTCCATA----ACAGAATTTTGGCATAGACATAC 44634 || | || || | || |||| ||| ||||| ||||| || | || || Sbjct 37123 AGCCAAGCCAGAACGTGGAGCTACTCTCCCATAGCACCCAGAA----GGAAGAGCTATCT 37068 Query 44635 GAATATCTGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACT 44692 |||| |||||||| | ||| | |||||||| || || | || ||||| || |||| Sbjct 37067 GAATGTCTGTTTTCA-CAA-GGGCTTTCTCCATAGATGGTACTGTGTAATCATAGGCACC 37010 Query 44693 GTATAAATCATATCCTGCCGC 44713 ||||| ||||| || || || Sbjct 37009 GTATACGTCATAGCCCGCGGC 36989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710790632994240