Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq15 136 9e-27 seq12339 123 6e-23 seq24761 109 1e-18 seq2586 105 2e-17 seq4599 102 2e-16 seq4730 98.7 2e-15 seq23190 93.3 1e-13 seq11754 91.5 3e-13 seq7051 91.5 3e-13 seq732 84.2 5e-11 >seq15 Length=680746 Score = 136 bits (150), Expect = 9e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||||||||| || || || |||||||| |||||||||||||| | | ||| Sbjct 219424 CCTCAGACGGAGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGT 219365 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || ||||| |||||||||||||| | | ||| || Sbjct 219364 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 219305 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| || || || || || || |||| | | |||| ||| ||| || || Sbjct 219304 TTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 219248 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || ||||||||||||| |||||| Sbjct 219247 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 219203 Score = 136 bits (150), Expect = 9e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||||||||| || || || |||||||| |||||||||||||| | | ||| Sbjct 219652 CCTCAGACGGAGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGT 219593 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || ||||| |||||||||||||| | | ||| || Sbjct 219592 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 219533 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 ||| || || || || || ||||| |||| | | |||| ||| ||| || || Sbjct 219532 TTCTTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 219476 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || ||||||||||||| |||||| Sbjct 219475 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 219431 Score = 136 bits (150), Expect = 9e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||||||||| || || || |||||||| |||||||||||||| | | ||| Sbjct 219880 CCTCAGACGGAGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGT 219821 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || ||||| |||||||||||||| | | ||| || Sbjct 219820 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 219761 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 ||| || || || || || || ||| |||| | | |||| ||| ||| || || Sbjct 219760 TTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 219704 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || ||||||||||||| |||||| Sbjct 219703 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 219659 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | ||||| || || ||||| |||||||| ||||||||||| || | | || Sbjct 219195 CTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 219136 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||||||| || ||||||||| ||||| || ||||||||||| | | ||| || Sbjct 219135 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGTGGGATGCCC 219076 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || |||||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 219075 TCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 219019 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || || | ||||||||||||| ||||||| Sbjct 219018 AGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATT 218974 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| || ||||| ||||||||||| || | | || | ||||||| Sbjct 220098 AGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 220039 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || |||||| || ||||| | |||||||||||| | | ||| || ||||| || Sbjct 220038 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 219979 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||| |||| | | |||| ||| ||| || || || || || Sbjct 219978 TGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 219922 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 219921 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 219887 >seq12339 Length=50223 Score = 123 bits (136), Expect = 6e-23 Identities = 158/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || |||||||| |||||||||||||| | | ||| | |||||| Sbjct 7523 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 7582 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| |||||||||||||| | | ||| |||||||| || Sbjct 7583 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 7642 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || || |||| | | |||| ||| ||| || || || || || Sbjct 7643 TG-ATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 7698 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 7699 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 7733 >seq24761 Length=36067 Score = 109 bits (120), Expect = 1e-18 Identities = 155/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||| ||||||||| ||| | ||||| |||||||| || ||||| | Sbjct 10539 AGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTAGTCAAACAAAGTACGT 10598 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || ||||||||||| | || ||||||||| Sbjct 10599 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCC 10658 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | || || || || || ||||| Sbjct 10659 TTGTCCTGGATCTTAGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 10718 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 || || || || || || ||||||||||| | ||||| Sbjct 10719 ATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 10754 >seq2586 Length=172570 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||||||||| ||||| || || |||||||| || | ||||| | |||||||| Sbjct 46691 ACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 46750 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || ||||| || || |||||||| | | ||||||||||| || || Sbjct 46751 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 46810 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || || | ||||| || || || || || ||||| || || || Sbjct 46811 ATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTC 46870 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||| | ||||||||||| | ||||| Sbjct 46871 CCCGTCTGGGTCTTCACGAAAATCTGCA 46898 >seq4599 Length=129898 Score = 102 bits (112), Expect = 2e-16 Identities = 159/222 (72%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || |||||||| |||||||||||||| | | ||| Sbjct 43911 CCTCAGACAGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 43852 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| | ||| || || |||| |||||||||| ||| | || ||| || Sbjct 43851 GCGGCCATCTTCCATCTGTTTGCCTGCAAAGAGGAGCCTCTGCTTGTCAG-CGGGATGCC 43793 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||| || || || || || | ||| |||| | ||| ||| ||| | |||| || Sbjct 43792 TTCTTTATCCTGGATCTTGGCCTGCACATTCTC-AGGCTCGCTGGGCTC-CACCTTC-AG 43736 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||| || || ||||||| ||||| |||||| Sbjct 43735 GGTGATGGTCTTGCAGGTCAGGGTCTTCATGAAGATCTGCAT 43694 >seq4730 Length=198489 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| | |||||||||||||| ||||| | ||| |||||| || |||| | Sbjct 51033 GAGTCTCAACACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTCC----AAGTACA 50978 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || || ||||| || || |||||||| | | |||||||| Sbjct 50977 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 50918 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| |||||| | || || || || || ||||| Sbjct 50917 CTTGTCCTGGATCTTGACCTTTACATTCTCTATCGTATCCGAGGGTTCGACCTCGAGAGT 50858 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || ||||| || |||||||| || | |||||| || Sbjct 50857 GACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATGTT 50816 >seq23190 Length=44765 Score = 93.3 bits (102), Expect = 1e-13 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| | ||| ||||| |||||||| || | | ||| | Sbjct 17133 AGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCCGACAGAGTACGT 17074 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||| ||| | || || || ||||| || || || ||||| | | ||||||||| Sbjct 17073 CCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCC 17014 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | || || | || | ||||| Sbjct 17013 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTTGAGAGTG 16954 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 16953 ATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 16913 >seq11754 Length=121357 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/217 (70%), Gaps = 11/217 (5%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || | ||||||||||| |||||||||||||| | | ||| Sbjct 47203 CCTTAGACGGAGGACCAGGTGCAAGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGT 47262 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || ||||| || ||| || || || || |||||||||||||| | | ||| || Sbjct 47263 GCGGCCGTCTTCCAGCTGTTTGCCTGCAAACATGAGCCTCTGCTGGTCAGGGGGGATGCC 47322 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCA 152060 ||| || || || || || || ||| ||| | | ||| ||| ||| | ||||| Sbjct 47323 TTCTTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTC-CACCTTCA 47381 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || |||||||| || |||||| |||||| Sbjct 47382 --------GGTCTTGCCCGTCAGGGTCTTCCCGAAGA 47410 >seq7051 Length=109996 Score = 91.5 bits (100), Expect = 3e-13 Identities = 147/208 (71%), Gaps = 9/208 (4%) Strand=Plus/Minus Query 151898 AAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG 151957 |||||||||||| ||||| ||||| |||||||| || ||||| | |||||||| | Sbjct 16287 AAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCA- 16233 Query 151958 GCTT--TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 ||| || || || ||||| || || |||||||| | | ||||||||||| || || Sbjct 16232 -CTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGG 16174 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || ||| | ||| | ||||| || |||||||||| || || | Sbjct 16173 ATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAGCTTCAAGAGTGATGGTCAT- 16115 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||| || ||||||| ||| | ||||| Sbjct 16114 CCCTGGAAGGTCTTCATGAAAATCTGCA 16087 >seq732 Length=284533 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| || || || ||||||||||| |||||||||||||| | | ||| | |||||||| Sbjct 46103 GACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTC 46162 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990 || ||| || || |||||||||||||||| ||| Sbjct 46163 CAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTTGTC 46198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150264566725747