Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq3026 174 2e-38 >seq3026 Length=153529 Score = 174 bits (192), Expect = 2e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||||| || || || |||||||||||| || ||||| |||||||| ||||| Sbjct 95497 GTCTGGAACAACTGTTCATCGTCCCATTCTGGATGCTCATGTTTAAGAACATCACACACT 95556 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||||||||||| ||||| || ||||| |||||||| || || || ||||| ||||| Sbjct 95557 CTGTTGTGTTCCCGCAGCCAAATTGTGGCATACATCATCAGACCGGGCACCAGACCAAAG 95616 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 | || || || ||||| | |||| || ||| || || | || || |||||||| | Sbjct 95617 ACTTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGAACATGAGGGGGGTAGATCATCTCG 95676 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484 ||||| |||||||| | ||| |||||||||||||| |||| |||| Sbjct 95677 ACCTGAGTATCTTTGACTGTGGGAGGATACATTTCACCACCAATTATCT 95725 Score = 138 bits (152), Expect = 2e-27 Identities = 213/304 (70%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 8283 GAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAG 8342 |||| | ||| | || || ||||| || || ||||| | |||| ||||||||||| | Sbjct 93858 GAACACTGAATGAGGTAAAAGGACAGCCTTTCACGTTATTGCAGATGAGAGACTGAATTG 93917 Query 8343 TTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACC 8402 || |||||| ||| || || || ||||| || || ||||| |||||||||||| Sbjct 93918 AGGCAGTCTTGATGATTTTAAAACCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTACT 93977 Query 8403 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGA 8462 | || || || || || |||| || ||||| | |||||| || || || | || | Sbjct 93978 CAGGAGAACATATAGGATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCAACTTCTA 94037 Query 8463 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8522 ||| |||| || |||||||||| || || |||||||| |||| | | | |||| Sbjct 94038 CCATGGTCTCCCCAAAGATGGCGTCTGGTCGAGGCTTTTCTACCAGCAGAGCAGGATACA 94097 Query 8523 GCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTC 8582 |||||| || || | ||| || || || || | || ||||| || ||||| |||| Sbjct 94098 GCTCCATGGCATCAATGTCACCATAGAGCGCTTCTAACTCCGCAGCCATTTCCTTCTCTC 94157 Query 8583 CTGT 8586 |||| Sbjct 94158 CTGT 94161 Score = 104 bits (114), Expect = 3e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| | | |||| | ||||| || || |||||| ||| ||| | || Sbjct 96543 TCTTACCCCATGGCTCTGTCCCGTGGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 96602 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||| || || ||||| || ||| |||| || |||||||| | || |||||||||||||| Sbjct 96603 AAATTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 96662 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTT 9828 || |||| | || | ||||| |||||||||||| | | | ||| || |||| Sbjct 96663 AGGGATGAACTTTCTTCTTAGAAGTACTTTTTCCACAACTTCTTTTGAATCAGGAAGCTC 96722 Query 9829 TGTTTTACCTGGTGAACGAGAA 9850 | | | |||| || ||||| Sbjct 96723 TTTCCTCCCTGAAAAATGAGAA 96744 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 ||||||||||| || | || ||||| || || | ||| || ||||| |||| || | | Sbjct 97152 TCACCTTTGACACCCATGGGTGTTGGGCAGTCATCAGGCACAGGAGGAAGAACTCTGGTG 97211 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||| || || || || |||||||||||| || |||||| | | || || | Sbjct 97212 TAATAGGACAGGTTAGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTGCACATTATAAGTT 97271 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || ||||||||||||| || ||||| |||| Sbjct 97272 GGCGGGCTGTCAATCAGATGTGATCTCGCTGA 97303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714721178345280