Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq63 107 1e-18 seq1 96.9 2e-15 >seq63 Length=14173813 Score = 107 bits (118), Expect = 1e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| |||| ||||| || | |||||||| || |||||| | ||||||||| Sbjct 113443 TGGCCTTTGCCACTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCGATATTCTGGT 113502 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||| ||| || ||||| || | | |||||||| || | |||||| | || | Sbjct 113503 TCAAGAATCGTGGCCTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGATG 113562 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 | || |||||||||||||||| || || |||| Sbjct 113563 AGGGCTTACACTGTGACTTTGCCTGCCTGATGTT 113596 >seq1 Length=9663177 Score = 96.9 bits (106), Expect = 2e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||| ||||| || | |||||||| || |||||| | |||||||||| Sbjct 2450343 TGGCCTTTGCCGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCGATATTCTGGC 2450284 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||||||| || ||||| || | |||||||||| || | |||||| | || | Sbjct 2450283 TCAAGAAACGTGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATG 2450224 Query 22868 A 22868 | Sbjct 2450223 A 2450223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356130187501057