Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq36 118 9e-22 >seq36 Length=6971902 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||| | || ||||| ||||| ||||| Sbjct 586005 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCT 586064 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || |||| || ||||| || || ||||| || |||||||| |||||||||||||| Sbjct 586065 GAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAAAGCTGAAGACC 586124 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 || | || | ||||| ||||| Sbjct 586125 CTGCGGCTGAGGCTGCGGCGCTG 586147 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || ||||| || ||||| ||||||||||| |||||||| ||||||||||||| Sbjct 588307 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAATTTGACATCTTCATCAACTACA 588366 Query 127439 TCGAGACTTACATG 127452 | || || |||||| Sbjct 588367 TAGAAACCTACATG 588380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429929557761128