Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq62 98.7 2e-15 >seq62 Length=55877296 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| |||||||| ||||| | || || | || ||||| | | || |||| |||| Sbjct 11741726 CTTTCTGGATATTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTCCTTGTCTGCAAAGA 11741667 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | || | ||| || | || || ||||||||||||||| | || || ||||| || | Sbjct 11741666 TGAGCCTCTGCTGGCCAGGGGGTATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATTCT 11741607 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || | ||| || | ||| | || || ||||| ||||| |||||||| ||||| | || Sbjct 11741606 TCATGGTATCTCTGGGTTCCAACTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCATGA 11741547 Query 288464 ATATCTGCATTATG 288477 | | ||||||| || Sbjct 11741546 AGACCTGCATTTTG 11741533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179294391964282