Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq18578 87.8 2e-12 >seq18578 Length=32749 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 14170 CGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGA 14229 |||| | || ||||| || || | || |||||||| ||| ||||||||||| || | Sbjct 29903 CGGGCAGCCCCTCATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCA 29962 Query 14230 CGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTG 14289 | | |||| |||| || || || ||||||||||| || || | || || | |||||| Sbjct 29963 CCACAGCTGCCCACTTCTGGAAGGTCCCATCTCCTGCAGGCCTGGTCTCCACAAGCTCTG 30022 Query 14290 TATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAA 14349 | || || | | || ||||| || | | ||| || | | || || || || || | Sbjct 30023 TGTCCTGGGTCAGGTCCTCTCCATCCTGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGA 30082 Query 14350 AACCCAAAGCCCAGCACC 14367 | |||| |||||||||| Sbjct 30083 AGCCCAGGGCCCAGCACC 30100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629095838793240