Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq63 102 2e-16 >seq63 Length=14173813 Score = 102 bits (112), Expect = 2e-16 Identities = 149/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 |||| ||||| | ||| || ||| | || |||||||| ||||||| || ||||| || Sbjct 113417 AGAG-GCTACCTATGGAGAACGGGTTGTGGCCTTTGCCACTGTGGAAGGAATCTTCTTTT 113475 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACT 25978 ||||| |||||| | || |||||| ||||| | || ||||| || || | Sbjct 113476 CTGGTTCTTTTGCGTCGATATTCTGGTTCAAGAATCGTGGCCTGATGCCTGGCCTCACAT 113535 Query 25979 TTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 ||||||| || || || ||||| || ||||| | ||| | || |||||||||||| | | Sbjct 113536 TTTCCAATGAACTTATTAGCAGAGATGAGGGCTTACACTGTGACTTTGCCTGCCTGATGT 113595 Query 26039 ACACGGGCCACTTGCTCCACAAACCTTCT 26067 || ||| || |||| ||||||||| Sbjct 113596 TCA---AACACCTGGTCCATAAACCTTCT 113621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928568248071360