Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq63 82.4 9e-11 seq1 82.4 9e-11 >seq63 Length=14173813 Score = 82.4 bits (90), Expect = 9e-11 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || ||| | |||||||||| | ||||| || ||| ||| Sbjct 113352 GCCATCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCTTTGCGTTGGATTGGG 113411 Query 65056 -ACAAAGTCTCGCT-CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCT 65113 |||||| ||| ||| | || || || | || ||||| |||||| || |||| Sbjct 113412 GACAAAGAG--GCTACCTATGGAGAACGGGTTGTGGCCTTTGCCACTGTGGAAGGAATCT 113469 Query 65114 TCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGC 65172 |||| || || || || |||| | || | ||||| ||||| || || || ||||| ||| Sbjct 113470 TCTTTTCTGGTTCTTT-TGCGTCGATATTCTGGTTCAAGAATCGTGGCCTGATGCCTGGC 113528 Query 65173 CTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || || |||||||||||| | |||||||||| | ||| || |||||| Sbjct 113529 CTCACATTTTCCAATGAACTTATTAGCAGAGATGAGGGCTTACACTGTGACTTTGCC 113585 >seq1 Length=9663177 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 |||||||||||||||||||| || ||| || || |||||||| ||||||||||||||| Sbjct 2449161 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 2449102 Query 65503 CGAGTTGGGGACTAT 65517 |||| || || ||| Sbjct 2449101 AGAGTAGGCGAGTAT 2449087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596391978858720