Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq48 100 7e-16 >seq48 Length=2952444 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 2404035 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAT 2404094 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||| || || || ||| || || || || || Sbjct 2404095 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTGATTTTT 2404154 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 2404155 GCTGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCTGATTACAACATCCAGAAAGAGTCG 2404214 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||||| ||| Sbjct 2404215 ACTCTCCACCTGGTT 2404229 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| ||| || ||||| Sbjct 2403351 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGATACCATCGAAAAT 2403410 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||| || || || ||| || || || ||||| Sbjct 2403411 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 2403470 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 2403471 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 2403530 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 2403531 ACTCTCCACCTGGT 2403544 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || ||||| |||| ||||| ||| Sbjct 2403567 CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAT 2403626 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| ||||| ||||| ||||| || || || ||| || Sbjct 2403627 ACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAG 2403686 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | ||| | | ||||||||| || Sbjct 2403687 AGGCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATC 2403746 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| || || ||||| || Sbjct 2403747 CAGAAAGAGTCAACCCTGCACCTGGT 2403772 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 2403807 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAT 2403866 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||| || || || ||| || || || ||||| Sbjct 2403867 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 2403926 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| | ||||||||||| Sbjct 2403927 GCTGGTAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATTCAGAAAGAGTCG 2403986 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 2403987 ACCCTGCATCTGGT 2404000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181460130820299