Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq14 111 2e-19 >seq14 Length=22407316 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 214001 ATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAA 214060 ||||| || || || || ||||| || ||||| || | | ||| | ||| | ||| | Sbjct 20341787 ATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATACTCAGGTGGAGATGATCTACCCA 20341846 Query 214061 CCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCC 214120 ||| ||||| ||| | |||| || || |||| | || | || || || ||||| Sbjct 20341847 CCCCATGTTCCTGAACACCTACGGTTTGCCGTGGGCCAGGAAGTTTTCGGGCTGGTGCCT 20341906 Query 214121 GGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTG 214180 ||| | ||| |||| |||| || ||| || | || || ||||| || || || ||||| Sbjct 20341907 GGTCTGATGATGTATGCCACAATTTGGTTGCGGGAACATAACAGAGTGTGTGATGTGCTT 20341966 Query 214181 AAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGATCA 214226 ||||| |||||||| || ||| | || || | ||||||||||| || Sbjct 20341967 AAACAGGAGCACCCAGAGTGGGATGATGAGCGGCTGTTCCAGACCA 20342012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723125434318560