Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq63 82.4 1e-10 >seq63 Length=14173813 Score = 82.4 bits (90), Expect = 1e-10 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | |||||||||| | |||||||||||| || || || || Sbjct 113585 GGCAAAGTCACAGTGTAAGCCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCC 113526 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 ||||| || || || ||||| ||||| | || | |||| || || || || ||||||| Sbjct 113525 AGGCATCAGGCCACGATTCTTGAACCAGAATATCGACGCA-AAAGAACCAGAAAAGAAGA 113467 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTG-CATC 122834 | || |||||| ||||| || | || ||||| | ||| ||| ||||| | | Sbjct 113466 TTCCTTCCACAGTGGCAAAGGCCACAACCCGTTCTCCATAGGTAGC--CTCTTTGTCCCC 113409 Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891 || ||| || ||||| | |||||||||| | ||| || | || | |||||| Sbjct 113408 AATCCAACGCAAAGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGC 113352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627845011322400