Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09]
23,819 sequences; 2,301,379,344 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq101 170 3e-37
>seq101
Length=21342733
Score = 170 bits (188), Expect = 3e-37
Identities = 256/362 (71%), Gaps = 4/362 (1%)
Strand=Plus/Plus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742
||||||| ||||||||||| ||||| || || ||| | |||||||| ||||| ||| |
Sbjct 17004640 GAAGAGGCGGAGTTTCCCATAGCCTATTCTATAGTGGTTCACCACAAAATCGAAATGCTT 17004699
Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802
|| || ||||| |||||||||||| || ||||| |||||||| | |||||||||
Sbjct 17004700 GACCGGCTCCTCAGGGCCATCTACATGCCCCAGAATTTCTACTGCATTCACGTGGACAGA 17004759
Query 13803 AAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACG 13860
|| || | ||| || || ||| || | | | |||||| |||||| |||||
Sbjct 17004760 AAATCGGCCGATTCGTTTTTGGCCGCGGTGATT--GGCATCGCGTCCTGCTTCAGTAACG 17004817
Query 13861 TGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCG 13920
| ||||| | |||| | ||||||||| | |||||||||||| || |||||||
Sbjct 17004818 TCTTTGTGGCCAGTCAGCTGGAGAGCGTGGTGTATGCCTCCTGGAGTCGGGTTCAGGCCG 17004877
Query 13921 ACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACC 13980
|||||| ||||||| ||| | || || | |||| |||| || | || |
Sbjct 17004878 ACCTCAACTGCATGCAAGACGTCTACAGGATGAGCGCGGACTGGAAGTACTTGATAAATC 17004937
Query 13981 TGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCC 14040
| ||||| |||||||| || | || |||||| |||| || || ||| ||| ||| | |
Sbjct 17004938 TTTGCGGTATGGACTTTCCTATTAAAACCAACTTGGAAATTGTCCGGAAGCTCAAGTCGC 17004997
Query 14041 TG 14042
||
Sbjct 17004998 TG 17004999
Score = 87.8 bits (96), Expect = 2e-12
Identities = 186/274 (68%), Gaps = 8/274 (3%)
Strand=Plus/Plus
Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336
|||||||||||||| || ||| | || |||||||| | ||||| || | || | ||
Sbjct 17005231 GACACGTACAGCCCGGATGAGTATCTCTGGGCCACTATCCAGAGGATC--CCTGATGTCC 17005288
Query 14337 GGGGGGATCCCCGTTC--ACGTCA--AGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392
||| |||| || | | | || |||| |||| || |||||| || | | ||
Sbjct 17005289 CGGGT--TCCCTGTCCCTAAGCCAGAAGTATGACATGTCCGACATGCACGCGATTGCAAG 17005346
Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452
||||||||| ||||| |||| ||| || ||| | || || |||| ||||| || ||
Sbjct 17005347 GTTCGTCAAATGGCAGTACTTCGAAGGTGATGTTTCCAAGGGTGCCCCCTACCCACCCTG 17005406
Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512
| || ||||||| | | | ||| | ||||| | || ||| |||| ||| ||
Sbjct 17005407 CAGTGGGGTCCACGTGCGTTCTGTGTGCGTGTTCGGAGCAGGTGACTTGAACTGGATGTT 17005466
Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
|| | ||| |||||||||||||||| |||
Sbjct 17005467 ACGCAAGCATCACTTGTTCGCCAACAAGTTTGAC 17005500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658543068637440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |