Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq77 118 7e-22 >seq77 Length=12846609 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || || | |||| || |||||| |||||| || ||||| || || || Sbjct 3756487 GCCCCCCCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 3756428 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || ||| | ||||| || ||||| || ||||| || || | ||| ||||| || || Sbjct 3756427 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGGTCGGGGGG 3756368 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||||| || | | ||| ||||| | |||||| Sbjct 3756367 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTTTCAATGGTGTCACTGGGCTCCAC 3756308 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || ||||||||||| || || ||||| || |||||||| Sbjct 3756307 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 3756260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314638235865827