Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq10 185 7e-42 >seq10 Length=40277251 Score = 185 bits (204), Expect = 7e-42 Identities = 140/165 (85%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || ||||||||||| || |||||||| ||||| || | ||||||||||||||| |||||| Sbjct 9528512 AGGCCGGTGACGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 9528571 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||||||||| |||| |||||| |||||||| || ||||| |||| | | Sbjct 9528572 ACGCCCAGGCCCATGTCCCCCGACCGCTGGTACAGCTGGCAGGACAGCTCGCCGTTCCCC 9528631 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 ||||| ||||| || | |||||||||||||||||||||||| ||| Sbjct 9528632 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGAAGGGCCATCAGA 9528676 Score = 87.8 bits (96), Expect = 1e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 |||||||||||||| || || || || || || | || || ||||| |||| ||| Sbjct 9531097 AAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTTCTCTGTTGCAGAAT 9531156 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||| ||||||| || ||||||||||||||||| || || ||||| Sbjct 9531157 CCCAGGCTGTCCAAGAAGTCTCGAGACCCGTTGGCGTCCCAGATTTTCACTCCCTTGGAA 9531216 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || || || || | |||||| || || Sbjct 9531217 GACAGGTCCTTAGCGTTTGTAGATCC 9531242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406045293234634